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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g439000v5   uncharacterized protein 
 cre-r.1   CHLRE_01g001350v5   uncharacterized protein 
 ath-u.5   ABCD2   ABC transporter family protein 
 gma-u.5   102661014   ABC transporter D family member 2, chloroplastic 
 sly-u.5   ABCD2   ABC transporter D family member 2 
 osa-u.5   4324587   ABC transporter D family member 2, chloroplastic 
 zma-u.5   100279858   uncharacterized LOC100279858 
 bra-r.6   103869976   ABC transporter D family member 2, chloroplastic 
 vvi-u.5   100258729   ABC transporter D family member 2, chloroplastic 
 ppo-u.5   7464579   ABC transporter D family member 2, chloroplastic 
 mtr-u.5   25483745   ABC transporter D family member 2, chloroplastic 
 mtr-u.5   11445004   ABC transporter D family member 2, chloroplastic 
 tae-r.2   123060692   ABC transporter D family member 2, chloroplastic 
 tae-r.2   123069201   ABC transporter D family member 2, chloroplastic 
 tae-r.2   123077723   ABC transporter D family member 2, chloroplastic 
 hvu-r.1   123443127   ABC transporter D family member 2, chloroplastic 
 ghi-r.1   121213708   ABC transporter D family member 2, chloroplastic 
 ghi-r.1   107933109   ABC transporter D family member 2, chloroplastic 
 bna-r.1   106446534   ABC transporter D family member 2, chloroplastic 
 bna-r.1   106367468   ABC transporter D family member 2, chloroplastic 
 sbi-r.1   8081398   ABC transporter D family member 2, chloroplastic 
 sot-r.1   102581284   ABC transporter D family member 2, chloroplastic 
 cit-r.1   102617657   ABC transporter D family member 2, chloroplastic 
 bdi-r.1   100839801   ABC transporter D family member 2, chloroplastic 
 nta-r.1   107798686   ABC transporter D family member 2, chloroplastic 
 nta-r.1   107801232   ABC transporter D family member 2, chloroplastic-like 

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Top 50 coexpressed genes to CHLRE_10g439000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g439000v5 (cre-r.1 coexpression data)

CoexMap"5716007"


creCHLRE_10g439000v5 | Entrez gene ID : 5716007    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 1 1 1 1 1 1 1 1 2 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0055085 [list] [network] transmembrane transport  (461 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO MF
GO:0140359 [list] [network] ABC-type transporter activity  (65 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (290 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042920164.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_042920164.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_042920164.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g439000v5
cre-r.1
for
CHLRE_01g001350v5
ath-u.5
for
ABCD2
gma-u.5
for
102661014
sly-u.5
for
ABCD2
osa-u.5
for
4324587
zma-u.5
for
100279858
bra-r.6
for
103869976
vvi-u.5
for
100258729
ppo-u.5
for
7464579
mtr-u.5
for
25483745
mtr-u.5
for
11445004
tae-r.2
for
123060692
tae-r.2
for
123069201
tae-r.2
for
123077723
hvu-r.1
for
123443127
ghi-r.1
for
121213708
ghi-r.1
for
107933109
bna-r.1
for
106446534
bna-r.1
for
106367468
sbi-r.1
for
8081398
sot-r.1
for
102581284
cit-r.1
for
102617657
bdi-r.1
for
100839801
nta-r.1
for
107798686
nta-r.1
for
107801232


Ortholog ID: 9845
Species cre cre ath gma sly osa zma bra vvi ppo mtr mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_10g439000v5 CHLRE_01g001350v5 ABCD2 LOC102661014 ABCD2 LOC4324587 LOC100279858 LOC103869976 LOC100258729 LOC7464579 LOC25483745 LOC11445004 LOC123060692 LOC123069201 LOC123077723 LOC123443127 LOC121213708 LOC107933109 LOC106446534 LOC106367468 LOC8081398 LOC102581284 LOC102617657 LOC100839801 LOC107798686 LOC107801232
Function* uncharacterized protein uncharacterized protein ABC transporter family protein ABC transporter D family member 2, chloroplastic ABC transporter D family member 2 ABC transporter D family member 2, chloroplastic uncharacterized LOC100279858 ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic ABC transporter D family member 2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
tae00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01212 Fatty acid metabolism 3
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716007 5725887 841876 102661014 101256258 4324587 100279858 103869976 100258729 7464579 25483745 11445004 123060692 123069201 123077723 123443127 121213708 107933109 106446534 106367468 8081398 102581284 102617657 100839801 107798686 107801232
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