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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g440500v5   uncharacterized protein 
 ath-u.5   AT2G26270   BRCT domain DNA repair protein 
 gma-u.5   100815253   uncharacterized LOC100815253 
 gma-u.5   100807358   uncharacterized LOC100807358 
 sly-u.5   101266055   uncharacterized LOC101266055 
 osa-u.5   4347171   uncharacterized LOC4347171 
 zma-u.5   103636628   uncharacterized LOC103636628 
 zma-u.5   103632816   uncharacterized LOC103632816 
 bra-r.6   103864725   uncharacterized LOC103864725 
 vvi-u.5   100262753   uncharacterized LOC100262753 
 ppo-u.5   7491978   uncharacterized LOC7491978 
 mtr-u.5   25480494   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-u.5   11437026   uncharacterized LOC11437026 
 tae-r.2   123121539   uncharacterized LOC123121539 
 tae-r.2   123111972   uncharacterized LOC123111972 
 tae-r.2   123103755   uncharacterized LOC123103755 
 hvu-r.1   123397437   uncharacterized LOC123397437 
 ghi-r.1   107932868   uncharacterized LOC107932868 
 ghi-r.1   121231962   uncharacterized LOC121231962 
 ghi-r.1   121204788   uncharacterized LOC121204788 
 bna-r.1   106401666   uncharacterized LOC106401666 
 bna-r.1   106446787   uncharacterized LOC106446787 
 sbi-r.1   8062743   uncharacterized LOC8062743 
 sot-r.1   102596283   uncharacterized LOC102596283 
 cit-r.1   102624869   uncharacterized LOC102624869 
 bdi-r.1   100830981   uncharacterized LOC100830981 
 nta-r.1   107796887   uncharacterized LOC107796887 
 nta-r.1   107812003   uncharacterized LOC107812003 

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Top 50 coexpressed genes to CHLRE_10g440500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g440500v5 (cre-r.1 coexpression data)

CoexMap"5716133"


creCHLRE_10g440500v5 | Entrez gene ID : 5716133    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 1 1 1 2 3 1 3 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042920180.1 [sequence] [blastp]
XP_042920181.1 [sequence] [blastp]
Subcellular
localization
wolf
pero 4,  extr 3,  nucl 2,  chlo 1,  E.R. 1  (predict for XP_042920180.1)
pero 4,  extr 3,  nucl 2,  chlo 1,  E.R. 1  (predict for XP_042920181.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042920180.1)
other 8  (predict for XP_042920181.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g440500v5
ath-u.5
for
AT2G26270
gma-u.5
for
100815253
gma-u.5
for
100807358
sly-u.5
for
101266055
osa-u.5
for
4347171
zma-u.5
for
103636628
zma-u.5
for
103632816
bra-r.6
for
103864725
vvi-u.5
for
100262753
ppo-u.5
for
7491978
mtr-u.5
for
25480494
mtr-u.5
for
11437026
tae-r.2
for
123121539
tae-r.2
for
123111972
tae-r.2
for
123103755
hvu-r.1
for
123397437
ghi-r.1
for
107932868
ghi-r.1
for
121231962
ghi-r.1
for
121204788
bna-r.1
for
106401666
bna-r.1
for
106446787
sbi-r.1
for
8062743
sot-r.1
for
102596283
cit-r.1
for
102624869
bdi-r.1
for
100830981
nta-r.1
for
107796887
nta-r.1
for
107812003


Ortholog ID: 6503
Species cre ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_10g440500v5 AT2G26270 LOC100815253 LOC100807358 LOC101266055 LOC4347171 LOC103636628 LOC103632816 LOC103864725 LOC100262753 LOC7491978 LOC25480494 LOC11437026 LOC123121539 LOC123111972 LOC123103755 LOC123397437 LOC121204788 LOC107958806 LOC107925584 LOC106401666 LOC106446787 LOC8062743 LOC102596283 LOC102624869 LOC100830981 LOC107796887 LOC107812003
Function* uncharacterized protein BRCT domain DNA repair protein uncharacterized LOC100815253 uncharacterized LOC100807358 uncharacterized LOC101266055 uncharacterized LOC4347171 uncharacterized LOC103636628 uncharacterized LOC103632816 uncharacterized LOC103864725 uncharacterized LOC100262753 uncharacterized LOC7491978 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic uncharacterized LOC11437026 uncharacterized LOC123121539 uncharacterized LOC123111972 uncharacterized LOC123103755 uncharacterized LOC123397437 uncharacterized LOC121204788 uncharacterized LOC107958806 uncharacterized LOC107925584 uncharacterized LOC106401666 uncharacterized LOC106446787 uncharacterized LOC8062743 uncharacterized LOC102596283 uncharacterized LOC102624869 uncharacterized LOC100830981 uncharacterized LOC107796887 uncharacterized LOC107812003
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 5
gma04075 Plant hormone signal transduction 2
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 5
ppo00270 Cysteine and methionine metabolism 3
ppo00450 Selenocompound metabolism 3
ppo03018 RNA degradation 2
ppo00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716133 817167 100815253 100807358 101266055 4347171 103636628 103632816 103864725 100262753 7491978 25480494 11437026 123121539 123111972 123103755 123397437 121204788 107958806 107925584 106401666 106446787 8062743 102596283 102624869 100830981 107796887 107812003
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