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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g332800v5   uncharacterized protein 
 ath-u.5   AT1G63810   nucleolar protein 
 gma-u.5   100779287   nucleolar protein 6 
 gma-u.5   100776157   nucleolar protein 6 
 sly-u.5   101260390   uncharacterized LOC101260390 
 osa-u.5   4351600   uncharacterized LOC4351600 
 zma-u.5   100280396   uncharacterized LOC100280396 
 bra-r.6   103834989   nucleolar protein 6 
 vvi-u.5   100242719   uncharacterized LOC100242719 
 ppo-u.5   18101218   uncharacterized LOC18101218 
 mtr-u.5   11413629   nucleolar protein 6 
 tae-r.2   123120091   nucleolar protein 6 
 tae-r.2   123111097   nucleolar protein 6 
 tae-r.2   123102932   nucleolar protein 6 
 hvu-r.1   123451792   nucleolar protein 6 
 ghi-r.1   107913072   nucleolar protein 6 
 ghi-r.1   107901391   nucleolar protein 6 
 bna-r.1   125594282   nucleolar protein 6-like 
 bna-r.1   125599345   nucleolar protein 6-like 
 bna-r.1   125599253   nucleolar protein 6-like 
 sbi-r.1   8073495   nucleolar protein 6 
 sot-r.1   102580460   nucleolar protein 6 
 cit-r.1   102628475   uncharacterized LOC102628475 
 bdi-r.1   100844306   nucleolar protein 6 
 nta-r.1   107769877   uncharacterized LOC107769877 
 nta-r.1   107777093   uncharacterized LOC107777093 

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Top 50 coexpressed genes to CHLRE_07g332800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g332800v5 (cre-r.1 coexpression data)

CoexMap"5716138"


creCHLRE_07g332800v5 | Entrez gene ID : 5716138      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03008 [list] [network] Ribosome biogenesis in eukaryotes (47 genes)
GO BP
GO:0006409 [list] [network] tRNA export from nucleus  (2 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0032545 [list] [network] CURI complex  (2 genes)  IEA  
GO:0034456 [list] [network] UTP-C complex  (2 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (35 genes)  IEA  
GO MF
Protein XP_001690603.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  plas 3,  cyto_plas 3,  chlo 1,  cysk 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_001690603.2)
Subcellular
localization
TargetP
other 8  (predict for XP_001690603.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g332800v5
ath-u.5
for
AT1G63810
gma-u.5
for
100779287
gma-u.5
for
100776157
sly-u.5
for
101260390
osa-u.5
for
4351600
zma-u.5
for
100280396
bra-r.6
for
103834989
vvi-u.5
for
100242719
ppo-u.5
for
18101218
mtr-u.5
for
11413629
tae-r.2
for
123120091
tae-r.2
for
123111097
tae-r.2
for
123102932
hvu-r.1
for
123451792
ghi-r.1
for
107913072
ghi-r.1
for
107901391
bna-r.1
for
125594282
bna-r.1
for
125599345
bna-r.1
for
125599253
sbi-r.1
for
8073495
sot-r.1
for
102580460
cit-r.1
for
102628475
bdi-r.1
for
100844306
nta-r.1
for
107769877
nta-r.1
for
107777093


Ortholog ID: 6741
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_07g332800v5 AT1G63810 LOC100779287 LOC100776157 LOC101260390 LOC4351600 LOC100280396 LOC103834989 LOC100242719 LOC18101218 LOC11413629 LOC123120091 LOC123111097 LOC123102932 LOC123451792 LOC107913072 LOC107901391 LOC125599253 LOC125599252 LOC106389808 LOC8073495 LOC102580460 LOC102628475 LOC100844306 LOC107769877 LOC107777093
Function* uncharacterized protein nucleolar protein nucleolar protein 6 nucleolar protein 6 uncharacterized LOC101260390 uncharacterized LOC4351600 uncharacterized LOC100280396 nucleolar protein 6 uncharacterized LOC100242719 uncharacterized LOC18101218 nucleolar protein 6 nucleolar protein 6 nucleolar protein 6 nucleolar protein 6 nucleolar protein 6 nucleolar protein 6 nucleolar protein 6 nucleolar protein 6-like nucleolar protein 6-like nucleolar protein 6-like nucleolar protein 6 nucleolar protein 6 uncharacterized LOC102628475 nucleolar protein 6 uncharacterized LOC107769877 uncharacterized LOC107777093
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 9
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03430 Mismatch repair 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
ghi03020 RNA polymerase 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 7
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716138 842684 100779287 100776157 101260390 4351600 100280396 103834989 100242719 18101218 11413629 123120091 123111097 123102932 123451792 107913072 107901391 125599253 125599252 106389808 8073495 102580460 102628475 100844306 107769877 107777093
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