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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g277050v5   uncharacterized protein 
 ath-u.5   AT1G13160   ARM repeat superfamily protein 
 gma-u.5   100816774   protein SDA1 homolog 
 sly-u.5   101253571   uncharacterized LOC101253571 
 osa-u.5   4337094   uncharacterized LOC4337094 
 zma-u.5   103645893   protein SDA1 homolog 
 zma-u.5   100275026   stress response protein NST1 
 bra-r.6   103843069   protein SDA1 homolog 
 vvi-u.5   100252440   uncharacterized LOC100252440 
 ppo-u.5   7473195   uncharacterized LOC7473195 
 mtr-u.5   11422176   protein SDA1 homolog 
 tae-r.2   123112407   protein SDA1 homolog 
 tae-r.2   123121927   protein SDA1 homolog 
 tae-r.2   123190563   protein SDA1 homolog 
 hvu-r.1   123427959   protein SDA1 homolog 
 ghi-r.1   107941459   protein SDA1 homolog 
 ghi-r.1   107931040   protein SDA1 homolog 
 bna-r.1   106415935   protein SDA1 homolog 
 bna-r.1   106401689   protein SDA1 homolog 
 bna-r.1   125602911   protein SDA1 homolog 
 sbi-r.1   8074754   protein SDA1 homolog 
 sot-r.1   102594453   protein SDA1 homolog 
 cit-r.1   102627573   uncharacterized LOC102627573 
 bdi-r.1   100840171   protein SDA1 homolog 
 nta-r.1   107825226   uncharacterized LOC107825226 
 nta-r.1   107828275   uncharacterized LOC107828275 

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Top 50 coexpressed genes to CHLRE_06g277050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g277050v5 (cre-r.1 coexpression data)

CoexMap"5716273"


creCHLRE_06g277050v5 | Entrez gene ID : 5716273    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 2 1 1 1 1 3 1 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000055 [list] [network] ribosomal large subunit export from nucleus  (6 genes)  IEA  
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (52 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
Protein XP_042923735.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  cyto 1,  plas 1,  vacu 1,  cyto_mito 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_042923735.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042923735.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g277050v5
ath-u.5
for
AT1G13160
gma-u.5
for
100816774
sly-u.5
for
101253571
osa-u.5
for
4337094
zma-u.5
for
103645893
zma-u.5
for
100275026
bra-r.6
for
103843069
vvi-u.5
for
100252440
ppo-u.5
for
7473195
mtr-u.5
for
11422176
tae-r.2
for
123112407
tae-r.2
for
123121927
tae-r.2
for
123190563
hvu-r.1
for
123427959
ghi-r.1
for
107941459
ghi-r.1
for
107931040
bna-r.1
for
106415935
bna-r.1
for
106401689
bna-r.1
for
125602911
sbi-r.1
for
8074754
sot-r.1
for
102594453
cit-r.1
for
102627573
bdi-r.1
for
100840171
nta-r.1
for
107825226
nta-r.1
for
107828275


Ortholog ID: 9056
Species cre ath gma sly osa zma zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_06g277050v5 AT1G13160 LOC100816774 LOC101253571 LOC4337094 LOC103645893 LOC100275026 LOC103843069 LOC100252440 LOC7473195 LOC11422176 LOC123112407 LOC123121927 LOC123190563 LOC123427959 LOC107941459 LOC107931040 LOC106415935 LOC106401689 LOC125602911 LOC8074754 LOC102594453 LOC102627573 LOC100840171 LOC107825226 LOC107828275
Function* uncharacterized protein ARM repeat superfamily protein protein SDA1 homolog uncharacterized LOC101253571 uncharacterized LOC4337094 protein SDA1 homolog stress response protein NST1 protein SDA1 homolog uncharacterized LOC100252440 uncharacterized LOC7473195 protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog protein SDA1 homolog uncharacterized LOC102627573 protein SDA1 homolog uncharacterized LOC107825226 uncharacterized LOC107828275
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna04120 Ubiquitin mediated proteolysis 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716273 837874 100816774 101253571 4337094 103645893 100275026 103843069 100252440 7473195 11422176 123112407 123121927 123190563 123427959 107941459 107931040 106415935 106401689 125602911 8074754 102594453 102627573 100840171 107825226 107828275
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