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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g501600v5   uncharacterized protein 
 cre-r.1   CHLRE_17g746547v5   uncharacterized protein 
 ath-u.5   AT2G31370   Basic-leucine zipper (bZIP) transcription factor family protein 
 ath-u.5   AT2G40620   Basic-leucine zipper (bZIP) transcription factor family protein 
 gma-u.5   100779731   bZIP transcription factor 29 
 gma-u.5   100786738   probable transcription factor PosF21 
 gma-u.5   BZIP3   bZIP transcription factor 3 
 sly-u.5   101248981   transcription factor RF2b 
 sly-u.5   101263700   transcription factor VIP1 
 sly-u.5   101263229   basic leucine zipper 61-like 
 osa-u.5   4344292   transcription factor RF2b-like 
 zma-u.5   103636641   basic leucine zipper 6 
 zma-u.5   100194309   uncharacterized LOC100194309 
 zma-u.5   100382174   uncharacterized LOC100382174 
 bra-r.6   103864254   transcription factor RF2a 
 bra-r.6   103865143   probable transcription factor PosF21 
 bra-r.6   103865820   bZIP transcription factor 18 
 vvi-u.5   100266402   probable transcription factor PosF21 
 vvi-u.5   100264275   bZIP transcription factor 29 
 ppo-u.5   7494384   bZIP transcription factor 18 
 ppo-u.5   7453607   bZIP transcription factor 29 
 ppo-u.5   18106892   probable transcription factor PosF21 
 mtr-u.5   11444362   bZIP transcription factor 29 
 mtr-u.5   25496079   transcription factor VIP1 
 mtr-u.5   25487274   basic leucine zipper 61 
 tae-r.2   123043686   transcription factor RF2b 
 tae-r.2   123079209   basic leucine zipper 6 
 tae-r.2   123045889   transcription factor RF2a 
 hvu-r.1   123399922   transcription factor RF2a-like 
 hvu-r.1   123395088   basic leucine zipper 19-like 
 ghi-r.1   107916281   transcription factor RF2b 
 ghi-r.1   107918240   basic leucine zipper 61 
 ghi-r.1   107910718   bZIP transcription factor 29 
 bna-r.1   106388273   basic leucine zipper 34 
 bna-r.1   106428101   basic leucine zipper 34-like 
 bna-r.1   106431548   basic leucine zipper 34 
 sbi-r.1   8082334   transcription factor RF2b 
 sbi-r.1   8060559   transcription factor RF2a 
 sot-r.1   102597510   transcription factor VIP1-like 
 sot-r.1   102602950   probable transcription factor PosF21 
 sot-r.1   102600483   basic leucine zipper 34-like 
 cit-r.1   102613352   bZIP transcription factor 29 
 bdi-r.1   100828964   transcription factor RF2b 
 bdi-r.1   100841983   transcription factor VIP1 
 bdi-r.1   100834879   transcription factor RF2b 
 nta-r.1   107801377   bZIP transcription factor 29-like 
 nta-r.1   107800850   basic leucine zipper 34-like 
 nta-r.1   107800205   transcription factor VIP1 

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Top 50 coexpressed genes to CHLRE_12g501600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g501600v5 (cre-r.1 coexpression data)

CoexMap"5716398"


creCHLRE_12g501600v5 | Entrez gene ID : 5716398    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 2 3 3 1 3 3 2 3 3 3 2 3 3 2 3 1 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (405 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (142 genes)  IEA  
Protein XP_042918273.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  chlo_mito 3  (predict for XP_042918273.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_042918273.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g501600v5
cre-r.1
for
CHLRE_17g746547v5
ath-u.5
for
AT2G31370
ath-u.5
for
AT2G40620
gma-u.5
for
100779731
gma-u.5
for
100786738
gma-u.5
for
BZIP3
sly-u.5
for
101248981
sly-u.5
for
101263700
sly-u.5
for
101263229
osa-u.5
for
4344292
zma-u.5
for
103636641
zma-u.5
for
100194309
zma-u.5
for
100382174
bra-r.6
for
103864254
bra-r.6
for
103865143
bra-r.6
for
103865820
vvi-u.5
for
100266402
vvi-u.5
for
100264275
ppo-u.5
for
7494384
ppo-u.5
for
7453607
ppo-u.5
for
18106892
mtr-u.5
for
11444362
mtr-u.5
for
25496079
mtr-u.5
for
25487274
tae-r.2
for
123043686
tae-r.2
for
123079209
tae-r.2
for
123045889
hvu-r.1
for
123399922
hvu-r.1
for
123395088
ghi-r.1
for
107916281
ghi-r.1
for
107918240
ghi-r.1
for
107910718
bna-r.1
for
106388273
bna-r.1
for
106428101
bna-r.1
for
106431548
sbi-r.1
for
8082334
sbi-r.1
for
8060559
sot-r.1
for
102597510
sot-r.1
for
102602950
sot-r.1
for
102600483
cit-r.1
for
102613352
bdi-r.1
for
100828964
bdi-r.1
for
100841983
bdi-r.1
for
100834879
nta-r.1
for
107801377
nta-r.1
for
107800850
nta-r.1
for
107800205


Ortholog ID: 56
Species cre cre ath ath gma gma gma sly sly sly osa osa zma zma zma bra bra vvi vvi ppo ppo ppo mtr tae tae hvu hvu hvu ghi ghi ghi bna bna sbi sbi sbi sot sot sot cit bdi bdi bdi nta nta nta
Symbol CHLRE_12g501600v5 CHLRE_17g746547v5 AT2G31370 AT2G21230 LOC100786738 BZIP85 BZIP21 LOC101257481 LOC101255499 LOC101250636 LOC4349212 LOC4325139 LOC100194309 LOC100384258 LOC100281364 LOC103866631 LOC103835156 LOC100258873 LOC100243248 LOC18106892 LOC7463986 LOC7467825 LOC25496079 LOC123045889 LOC123112713 LOC123395088 LOC123427115 LOC123439633 LOC107910451 LOC107962371 LOC107951626 LOC106450693 LOC106365699 LOC8070663 LOC8075600 LOC8073481 LOC102600483 LOC102598221 LOC102582552 LOC102614282 LOC100824834 LOC100843010 LOC100844577 LOC107800850 LOC107794181 LOC107760642
Function* uncharacterized protein uncharacterized protein Basic-leucine zipper (bZIP) transcription factor family protein Basic-leucine zipper (bZIP) transcription factor family protein probable transcription factor PosF21 bZIP transcription factor 85 bZIP transcription factor 21 transcription factor VIP1 transcription factor RF2b-like bZIP transcription factor 29 bZIP transcription factor 29 basic leucine zipper 6-like uncharacterized LOC100194309 uncharacterized LOC100384258 uncharacterized LOC100281364 basic leucine zipper 34 bZIP transcription factor 18 basic leucine zipper 34 transcription factor RF2b probable transcription factor PosF21 bZIP transcription factor 29 transcription factor VIP1 transcription factor VIP1 transcription factor RF2a transcription factor RF2a basic leucine zipper 19-like transcription factor RF2a-like basic leucine zipper 2-like transcription factor VIP1 transcription factor RF2b transcription factor VIP1 bZIP transcription factor 18 probable transcription factor PosF21 transcription factor VIP1 basic leucine zipper 6 transcription factor VIP1 basic leucine zipper 34-like transcription factor RF2a transcription factor RF2b bZIP transcription factor 18 transcription factor RF2b transcription factor RF2a basic leucine zipper 6 basic leucine zipper 34-like basic leucine zipper 34-like putative transcription factor PosF21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 3
gma04517 IgSF CAM signaling 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00514 Other types of O-glycan biosynthesis 4
ghi00562 Inositol phosphate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 6
bna03015 mRNA surveillance pathway 4
bna04136 Autophagy - other 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716398 5729120 817695 816660 100786738 100807712 780560 101257481 101255499 101250636 4349212 4325139 100194309 100384258 100281364 103866631 103835156 100258873 100243248 18106892 7463986 7467825 25496079 123045889 123112713 123395088 123427115 123439633 107910451 107962371 107951626 106450693 106365699 8070663 8075600 8073481 102600483 102598221 102582552 102614282 100824834 100843010 100844577 107800850 107794181 107760642
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