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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g508550v5   uncharacterized protein 
 ath-u.5   KPHMT1   ketopantoate hydroxymethyltransferase 1 
 ath-u.5   PANB2   Phosphoenolpyruvate carboxylase family protein 
 gma-u.5   100808841   3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 
 sly-u.5   101263146   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 
 osa-u.5   4326739   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 
 osa-u.5   107275880   3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 
 zma-u.5   100283732   3-methyl-2-oxobutanoate hydroxymethyltransferase 
 bra-r.6   103841976   3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 
 bra-r.6   103830302   3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 
 vvi-u.5   100251716   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 ppo-u.5   7494115   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 mtr-u.5   25491946   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 mtr-u.5   120580006   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 mtr-u.5   25500823   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 tae-r.2   123077840   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 tae-r.2   123060760   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 tae-r.2   123069319   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 hvu-r.1   123443227   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 ghi-r.1   107930502   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 ghi-r.1   107921292   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 ghi-r.1   121219828   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 bna-r.1   106368474   3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 
 bna-r.1   106353271   3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 
 bna-r.1   111213662   3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 
 sbi-r.1   8079471   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 sbi-r.1   8079473   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 sot-r.1   102603485   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 
 cit-r.1   127901502   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 
 cit-r.1   102622815   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 bdi-r.1   100844970   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 nta-r.1   107805656   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 
 nta-r.1   107781389   3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 

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Top 50 coexpressed genes to CHLRE_12g508550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g508550v5 (cre-r.1 coexpression data)

CoexMap"5716522"


creCHLRE_12g508550v5 | Entrez gene ID : 5716522      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 1 1 2 1 2 1 1 3 3 1 3 3 2 1 2 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00770 [list] [network] Pantothenate and CoA biosynthesis (16 genes)
cre01240 [list] [network] Biosynthesis of cofactors (149 genes)
GO BP
GO:0015940 [list] [network] pantothenate biosynthetic process  (2 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0003864 [list] [network] 3-methyl-2-oxobutanoate hydroxymethyltransferase activity  (1 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (45 genes)  IEA  
Protein XP_001690847.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  chlo 3,  golg_plas 3,  golg 1,  vacu 1,  chlo_mito 1  (predict for XP_001690847.2)
Subcellular
localization
TargetP
scret 2  (predict for XP_001690847.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g508550v5
ath-u.5
for
KPHMT1
ath-u.5
for
PANB2
gma-u.5
for
100808841
sly-u.5
for
101263146
osa-u.5
for
4326739
osa-u.5
for
107275880
zma-u.5
for
100283732
bra-r.6
for
103841976
bra-r.6
for
103830302
vvi-u.5
for
100251716
ppo-u.5
for
7494115
mtr-u.5
for
25491946
mtr-u.5
for
120580006
mtr-u.5
for
25500823
tae-r.2
for
123077840
tae-r.2
for
123060760
tae-r.2
for
123069319
hvu-r.1
for
123443227
ghi-r.1
for
107930502
ghi-r.1
for
107921292
ghi-r.1
for
121219828
bna-r.1
for
106368474
bna-r.1
for
106353271
bna-r.1
for
111213662
sbi-r.1
for
8079471
sbi-r.1
for
8079473
sot-r.1
for
102603485
cit-r.1
for
127901502
cit-r.1
for
102622815
bdi-r.1
for
100844970
nta-r.1
for
107805656
nta-r.1
for
107781389


Ortholog ID: 5978
Species cre ath ath gma sly osa osa zma bra bra vvi ppo mtr mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sbi sot cit cit bdi nta nta
Symbol CHLRE_12g508550v5 KPHMT1 PANB2 LOC100808841 LOC101263146 LOC4326739 LOC107275880 LOC100283732 LOC103841976 LOC103830302 LOC100251716 LOC7494115 LOC25491946 LOC120580006 LOC25500823 LOC123077840 LOC123060760 LOC123069319 LOC123443227 LOC107930502 LOC107921292 LOC121219828 LOC106353271 LOC111213662 LOC106412352 LOC8079471 LOC8079473 LOC102603485 LOC127901502 LOC102622815 LOC100844970 LOC107805656 LOC107781389
Function* uncharacterized protein ketopantoate hydroxymethyltransferase 1 Phosphoenolpyruvate carboxylase family protein 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 3
ath01240 Biosynthesis of cofactors 3
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 3
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00480 Glutathione metabolism 4
ath00280 Valine, leucine and isoleucine degradation 3
ath01212 Fatty acid metabolism 3
ath04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 3
gma04712 Circadian rhythm - plant 2
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sly01230 Biosynthesis of amino acids 6
sly01240 Biosynthesis of cofactors 3
sly00561 Glycerolipid metabolism 2
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 3
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01212 Fatty acid metabolism 5
zma00061 Fatty acid biosynthesis 4
zma00900 Terpenoid backbone biosynthesis 3
zma00620 Pyruvate metabolism 3
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 6
vvi01240 Biosynthesis of cofactors 5
vvi00770 Pantothenate and CoA biosynthesis 3
vvi00780 Biotin metabolism 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00350 Tyrosine metabolism 3
ppo00360 Phenylalanine metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae01240 Biosynthesis of cofactors 6
tae00770 Pantothenate and CoA biosynthesis 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 7
tae00740 Riboflavin metabolism 4
tae00770 Pantothenate and CoA biosynthesis 3
tae00541 Biosynthesis of various nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae01230 Biosynthesis of amino acids 3
tae00770 Pantothenate and CoA biosynthesis 3
tae00740 Riboflavin metabolism 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 5
hvu00270 Cysteine and methionine metabolism 3
hvu01200 Carbon metabolism 3
hvu00940 Phenylpropanoid biosynthesis 3
hvu00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 5
ghi01240 Biosynthesis of cofactors 5
ghi00410 beta-Alanine metabolism 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 5
ghi01240 Biosynthesis of cofactors 5
ghi00410 beta-Alanine metabolism 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 5
ghi01240 Biosynthesis of cofactors 5
ghi03040 Spliceosome 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi01240 Biosynthesis of cofactors 3
sbi00940 Phenylpropanoid biosynthesis 2
sbi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit01240 Biosynthesis of cofactors 3
cit00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit01240 Biosynthesis of cofactors 3
cit00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00030 Pentose phosphate pathway 2
bdi00480 Glutathione metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716522 819219 825326 100808841 101263146 4326739 107275880 100283732 103841976 103830302 100251716 7494115 25491946 120580006 25500823 123077840 123060760 123069319 123443227 107930502 107921292 121219828 106353271 111213662 106412352 8079471 8079473 102603485 127901502 102622815 100844970 107805656 107781389
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