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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g509600v5   uncharacterized protein 
 ath-u.5   emb2191   Cytidine/deoxycytidylate deaminase family protein 
 gma-u.5   100306437   tRNA-specific adenosine deaminase TAD2 
 gma-u.5   100817106   tRNA-specific adenosine deaminase TAD2 
 sly-u.5   101257873   tRNA-specific adenosine deaminase TAD2 
 osa-u.5   4332682   tRNA-specific adenosine deaminase TAD2 
 bra-r.6   103833042   tRNA-specific adenosine deaminase TAD2 
 vvi-u.5   100855243   tRNA-specific adenosine deaminase TAD2 
 ppo-u.5   7474728   tRNA-specific adenosine deaminase TAD2 
 mtr-u.5   11436962   tRNA-specific adenosine deaminase TAD2 
 tae-r.2   123092275   tRNA-specific adenosine deaminase TAD2 
 tae-r.2   123097612   tRNA-specific adenosine deaminase TAD2 
 hvu-r.1   123448770   tRNA-specific adenosine deaminase TAD2 
 ghi-r.1   107948590   tRNA-specific adenosine deaminase TAD2 
 ghi-r.1   107899536   tRNA-specific adenosine deaminase TAD2 
 bna-r.1   106360558   tRNA-specific adenosine deaminase TAD2 
 sbi-r.1   8083697   tRNA-specific adenosine deaminase 2 
 sot-r.1   102583162   tRNA-specific adenosine deaminase 2 
 cit-r.1   102630641   tRNA-specific adenosine deaminase TAD2 
 bdi-r.1   100845457   tRNA-specific adenosine deaminase 2 
 nta-r.1   107822251   tRNA-specific adenosine deaminase TAD2 
 nta-r.1   107815883   tRNA-specific adenosine deaminase TAD2 
 nta-r.1   107802691   tRNA-specific adenosine deaminase TAD2-like 

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Top 50 coexpressed genes to CHLRE_12g509600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g509600v5 (cre-r.1 coexpression data)

CoexMap"5716546"


creCHLRE_12g509600v5 | Entrez gene ID : 5716546      
Species cre ath gma sly osa bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta zma
Paralog 1 1 2 1 1 1 1 1 1 2 1 2 1 1 1 1 1 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002100 [list] [network] tRNA wobble adenosine to inosine editing  (3 genes)  IEA  
GO CC
GO MF
GO:0052717 [list] [network] tRNA-specific adenosine-34 deaminase activity  (2 genes)  IEA  
Protein XP_042918146.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  cyto 2  (predict for XP_042918146.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042918146.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g509600v5
ath-u.5
for
emb2191
gma-u.5
for
100306437
gma-u.5
for
100817106
sly-u.5
for
101257873
osa-u.5
for
4332682
bra-r.6
for
103833042
vvi-u.5
for
100855243
ppo-u.5
for
7474728
mtr-u.5
for
11436962
tae-r.2
for
123092275
tae-r.2
for
123097612
hvu-r.1
for
123448770
ghi-r.1
for
107948590
ghi-r.1
for
107899536
bna-r.1
for
106360558
sbi-r.1
for
8083697
sot-r.1
for
102583162
cit-r.1
for
102630641
bdi-r.1
for
100845457
nta-r.1
for
107822251
nta-r.1
for
107815883
nta-r.1
for
107802691


Ortholog ID: 8279
Species cre ath gma gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta nta
Symbol CHLRE_12g509600v5 emb2191 LOC100306437 LOC100817106 LOC101257873 LOC4332682 LOC103833042 LOC100855243 LOC7474728 LOC11436962 LOC123092275 LOC123097612 LOC123448770 LOC107948590 LOC107899536 LOC125591658 LOC8083697 LOC102583162 LOC102630641 LOC100845457 LOC107822251 LOC107815883 LOC107802691
Function* uncharacterized protein Cytidine/deoxycytidylate deaminase family protein tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2-like tRNA-specific adenosine deaminase 2 tRNA-specific adenosine deaminase 2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase 2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2 tRNA-specific adenosine deaminase TAD2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716546 841237 100306437 100817106 101257873 4332682 103833042 100855243 7474728 11436962 123092275 123097612 123448770 107948590 107899536 125591658 8083697 102583162 102630641 100845457 107822251 107815883 107802691
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