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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1  CHLRE_12g487200v5  uncharacterized protein 
 cre-r.1  CHLRE_12g552900v5  uncharacterized protein 
 ath-u.5  AT1G71840  transducin family protein / WD-40 repeat family protein 
 gma-u.5  100790414  angio-associated migratory cell protein 
 sly-u.5  101261533  uncharacterized LOC101261533 
 osa-u.5  4333750  uncharacterized LOC4333750 
 zma-u.5  100381463  uncharacterized LOC100381463 
 zma-u.5  100273004  uncharacterized LOC100273004 
 bra-r.6  103830828  angio-associated migratory cell protein 
 bra-r.6  103831694  angio-associated migratory cell protein 
 vvi-u.5  100256222  uncharacterized LOC100256222 
 vvi-u.5  100254220  uncharacterized LOC100254220 
 ppo-u.5  7467446  uncharacterized LOC7467446 
 mtr-u.5  25485005  angio-associated migratory cell protein 
 tae-r.2  123051711  angio-associated migratory cell protein 
 tae-r.2  123187626  angio-associated migratory cell protein 
 hvu-r.1  123396973  uncharacterized LOC123396973 
 hvu-r.1  123424870  angio-associated migratory cell protein-like 
 ghi-r.1  107962146  angio-associated migratory cell protein 
 ghi-r.1  107956204  angio-associated migratory cell protein 
 ghi-r.1  107933669  angio-associated migratory cell protein 
 bna-r.1  106353753  angio-associated migratory cell protein-like 
 bna-r.1  106354175  angio-associated migratory cell protein-like 
 bna-r.1  106432270  angio-associated migratory cell protein-like 
 sbi-r.1  110436535  angio-associated migratory cell protein 
 sot-r.1  102586442  angio-associated migratory cell protein 
 cit-r.1  102621276  uncharacterized LOC102621276 
 bdi-r.1  100823131  angio-associated migratory cell protein 
 bdi-r.1  100827252  angio-associated migratory cell protein 
 bdi-r.1  100828758  angio-associated migratory cell protein 
 nta-r.1  107792949  uncharacterized LOC107792949 
 nta-r.1  107809133  uncharacterized LOC107809133 
 nta-r.1  107812411  uncharacterized LOC107812411 

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Top 50 coexpressed genes to CHLRE_12g487200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g487200v5 (cre-r.1 coexpression data)

CoexMap"5716640"


creCHLRE_12g487200v5 | Entrez gene ID : 5716640
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 1 1 1 1 2 2 2 1 1 2 2 3 3 1 1 1 3 3
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001691093.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1,  mito 1  (predict for XP_001691093.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001691093.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cre-r.1
for
CHLRE_12g487200v5


cre-r.1
for
CHLRE_12g552900v5


ath-u.5
for
AT1G71840


gma-u.5
for
100790414


sly-u.5
for
101261533


osa-u.5
for
4333750


zma-u.5
for
100381463


zma-u.5
for
100273004


bra-r.6
for
103830828


bra-r.6
for
103831694


vvi-u.5
for
100256222


vvi-u.5
for
100254220


ppo-u.5
for
7467446


mtr-u.5
for
25485005


tae-r.2
for
123051711


tae-r.2
for
123187626


hvu-r.1
for
123396973


hvu-r.1
for
123424870


ghi-r.1
for
107962146


ghi-r.1
for
107956204


ghi-r.1
for
107933669


bna-r.1
for
106353753


bna-r.1
for
106354175


bna-r.1
for
106432270


sbi-r.1
for
110436535


sot-r.1
for
102586442


cit-r.1
for
102621276


bdi-r.1
for
100823131


bdi-r.1
for
100827252


bdi-r.1
for
100828758


nta-r.1
for
107792949


nta-r.1
for
107809133


nta-r.1
for
107812411



Ortholog ID: 4318
Species cre cre ath gma sly osa zma zma bra bra vvi vvi ppo mtr tae hvu hvu ghi ghi ghi bna bna bna sbi sot cit bdi bdi bdi nta nta nta
Symbol CHLRE_12g487200v5 CHLRE_12g552900v5 AT1G71840 LOC100790414 LOC101261533 LOC4333750 LOC100381463 LOC100273004 LOC103830828 LOC103831694 LOC100256222 LOC100254220 LOC7467446 LOC25485005 LOC123043841 LOC123396973 LOC123424870 LOC107962146 LOC107933669 LOC107890913 LOC106353753 LOC106432270 LOC106401782 LOC110436535 LOC102586442 LOC102621276 LOC100823131 LOC100827252 LOC100828758 LOC107792949 LOC107809133 LOC107812411
Function* uncharacterized protein uncharacterized protein transducin family protein / WD-40 repeat family protein angio-associated migratory cell protein uncharacterized LOC101261533 uncharacterized LOC4333750 uncharacterized LOC100381463 uncharacterized LOC100273004 angio-associated migratory cell protein angio-associated migratory cell protein uncharacterized LOC100256222 uncharacterized LOC100254220 uncharacterized LOC7467446 angio-associated migratory cell protein angio-associated migratory cell protein uncharacterized LOC123396973 angio-associated migratory cell protein-like angio-associated migratory cell protein angio-associated migratory cell protein angio-associated migratory cell protein angio-associated migratory cell protein-like angio-associated migratory cell protein-like angio-associated migratory cell protein-like angio-associated migratory cell protein angio-associated migratory cell protein uncharacterized LOC102621276 angio-associated migratory cell protein angio-associated migratory cell protein angio-associated migratory cell protein uncharacterized LOC107792949 uncharacterized LOC107809133 uncharacterized LOC107812411
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 2
gma03010 Ribosome 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma00190 Oxidative phosphorylation 3
zma03015 mRNA surveillance pathway 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716640 5719694 843514 100790414 101261533 4333750 100381463 100273004 103830828 103831694 100256222 100254220 7467446 25485005 123043841 123396973 123424870 107962146 107933669 107890913 106353753 106432270 106401782 110436535 102586442 102621276 100823131 100827252 100828758 107792949 107809133 107812411
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