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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g309150v5   uncharacterized protein 
 ath-u.5   AT1G49590   C2H2 and C2HC zinc fingers superfamily protein 
 gma-u.5   100804274   zinc finger protein ZOP1 
 gma-u.5   100779677   zinc finger protein ZOP1 
 gma-u.5   100776500   zinc finger protein ZOP1 
 sly-u.5   101247074   zinc finger protein ZOP1 
 osa-u.5   4340481   zinc finger protein ZOP1 
 zma-u.5   100285446   nucleic acid binding protein 
 bra-r.6   103871383   zinc finger protein ZOP1 
 vvi-u.5   100246948   uncharacterized LOC100246948 
 ppo-u.5   7457519   zinc finger protein ZOP1 
 mtr-u.5   11445730   zinc finger protein ZOP1 
 tae-r.2   123165227   zinc finger protein ZOP1 
 tae-r.2   123157979   zinc finger protein ZOP1 
 tae-r.2   123150874   zinc finger protein ZOP1 
 hvu-r.1   123409629   zinc finger protein ZOP1 
 ghi-r.1   107928010   zinc finger protein ZOP1 
 ghi-r.1   121222241   zinc finger protein ZOP1 
 bna-r.1   106346141   zinc finger protein ZOP1-like 
 bna-r.1   106424431   zinc finger protein ZOP1 
 sbi-r.1   8070770   zinc finger protein ZOP1 
 sot-r.1   102604502   WW domain-binding protein 4 
 cit-r.1   102609013   zinc finger protein ZOP1 
 bdi-r.1   100823446   zinc finger protein ZOP1 
 nta-r.1   107814004   zinc finger protein ZOP1-like 
 nta-r.1   107788750   zinc finger protein ZOP1 

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Top 50 coexpressed genes to CHLRE_06g309150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g309150v5 (cre-r.1 coexpression data)

CoexMap"5716828"


creCHLRE_06g309150v5 | Entrez gene ID : 5716828    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (26 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (213 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042924465.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  mito 2  (predict for XP_042924465.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042924465.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g309150v5
ath-u.5
for
AT1G49590
gma-u.5
for
100804274
gma-u.5
for
100779677
gma-u.5
for
100776500
sly-u.5
for
101247074
osa-u.5
for
4340481
zma-u.5
for
100285446
bra-r.6
for
103871383
vvi-u.5
for
100246948
ppo-u.5
for
7457519
mtr-u.5
for
11445730
tae-r.2
for
123165227
tae-r.2
for
123157979
tae-r.2
for
123150874
hvu-r.1
for
123409629
ghi-r.1
for
107928010
ghi-r.1
for
121222241
bna-r.1
for
106346141
bna-r.1
for
106424431
sbi-r.1
for
8070770
sot-r.1
for
102604502
cit-r.1
for
102609013
bdi-r.1
for
100823446
nta-r.1
for
107814004
nta-r.1
for
107788750


Ortholog ID: 9834
Species cre ath gma gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_06g309150v5 AT1G49590 LOC100804274 LOC100779677 LOC100776500 LOC101247074 LOC4340481 LOC100285446 LOC103871383 LOC100246948 LOC7457519 LOC11445730 LOC123165227 LOC123157979 LOC123150874 LOC123409629 LOC107928010 LOC121222241 LOC106346141 LOC106424431 LOC8070770 LOC102604502 LOC102609013 LOC100823446 LOC107814004 LOC107788750
Function* uncharacterized protein C2H2 and C2HC zinc fingers superfamily protein zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 nucleic acid binding protein zinc finger protein ZOP1 uncharacterized LOC100246948 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1-like zinc finger protein ZOP1 zinc finger protein ZOP1 WW domain-binding protein 4 zinc finger protein ZOP1 zinc finger protein ZOP1 zinc finger protein ZOP1-like zinc finger protein ZOP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 4
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna04148 Efferocytosis 2
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716828 841383 100804274 100779677 100776500 101247074 4340481 100285446 103871383 100246948 7457519 11445730 123165227 123157979 123150874 123409629 107928010 121222241 106346141 106424431 8070770 102604502 102609013 100823446 107814004 107788750
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