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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g699500v5   uncharacterized protein 
 ath-u.5   AT1G77550   tubulin-tyrosine ligase 
 gma-u.5   100809212   tubulin--tyrosine ligase-like protein 12 
 sly-u.5   101252792   uncharacterized LOC101252792 
 osa-u.5   4331821   uncharacterized LOC4331821 
 zma-u.5   100285438   tubulin--tyrosine ligase-like protein 12 
 bra-r.6   103863718   tubulin--tyrosine ligase-like protein 12 
 vvi-u.5   100266448   uncharacterized LOC100266448 
 ppo-u.5   18100336   uncharacterized LOC18100336 
 mtr-u.5   25486508   tubulin--tyrosine ligase-like protein 12 
 tae-r.2   123098648   tubulin--tyrosine ligase-like protein 12 
 tae-r.2   123093371   tubulin--tyrosine ligase-like protein 12 
 tae-r.2   123084720   tubulin--tyrosine ligase-like protein 12 
 hvu-r.1   123449605   tubulin--tyrosine ligase-like protein 12 
 ghi-r.1   107901062   tubulin--tyrosine ligase-like protein 12 
 ghi-r.1   107952189   tubulin--tyrosine ligase-like protein 12 
 bna-r.1   106445025   tubulin--tyrosine ligase-like protein 12 
 bna-r.1   106435497   tubulin--tyrosine ligase-like protein 12 
 sbi-r.1   110431753   tubulin--tyrosine ligase-like protein 12 
 sot-r.1   102605923   tubulin--tyrosine ligase-like protein 12 
 cit-r.1   102615710   uncharacterized LOC102615710 
 bdi-r.1   100837823   tubulin--tyrosine ligase-like protein 12 
 nta-r.1   107823207   uncharacterized LOC107823207 
 nta-r.1   107784770   uncharacterized LOC107784770 

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Top 50 coexpressed genes to CHLRE_17g699500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g699500v5 (cre-r.1 coexpression data)

CoexMap"5717327"


creCHLRE_17g699500v5 | Entrez gene ID : 5717327      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018095 [list] [network] protein polyglutamylation  (12 genes)  IEA  
GO:0000226 [list] [network] microtubule cytoskeleton organization  (174 genes)  IEA  
GO CC
GO:0005929 [list] [network] cilium  (124 genes)  IEA  
GO MF
GO:0070740 [list] [network] tubulin-glutamic acid ligase activity  (12 genes)  IEA  
GO:0015631 [list] [network] tubulin binding  (149 genes)  IEA  
Protein XP_042914348.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 3  (predict for XP_042914348.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_042914348.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g699500v5
ath-u.5
for
AT1G77550
gma-u.5
for
100809212
sly-u.5
for
101252792
osa-u.5
for
4331821
zma-u.5
for
100285438
bra-r.6
for
103863718
vvi-u.5
for
100266448
ppo-u.5
for
18100336
mtr-u.5
for
25486508
tae-r.2
for
123098648
tae-r.2
for
123093371
tae-r.2
for
123084720
hvu-r.1
for
123449605
ghi-r.1
for
107901062
ghi-r.1
for
107952189
bna-r.1
for
106445025
bna-r.1
for
106435497
sbi-r.1
for
110431753
sot-r.1
for
102605923
cit-r.1
for
102615710
bdi-r.1
for
100837823
nta-r.1
for
107823207
nta-r.1
for
107784770


Ortholog ID: 11139
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_17g699500v5 AT1G77550 LOC100809212 LOC101252792 LOC4331821 LOC100285438 LOC103863718 LOC100266448 LOC18100336 LOC25486508 LOC123098648 LOC123093371 LOC123084720 LOC123449605 LOC107901062 LOC107952189 LOC106445025 LOC106435497 LOC110431753 LOC102605923 LOC102615710 LOC100837823 LOC107823207 LOC107784770
Function* uncharacterized protein tubulin-tyrosine ligase tubulin--tyrosine ligase-like protein 12 uncharacterized LOC101252792 uncharacterized LOC4331821 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 uncharacterized LOC100266448 uncharacterized LOC18100336 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 tubulin--tyrosine ligase-like protein 12 uncharacterized LOC102615710 tubulin--tyrosine ligase-like protein 12 uncharacterized LOC107823207 uncharacterized LOC107784770
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo01230 Biosynthesis of amino acids 3
ppo00300 Lysine biosynthesis 2
ppo00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr04075 Plant hormone signal transduction 2
mtr03082 ATP-dependent chromatin remodeling 2
mtr00230 Purine metabolism 2
mtr00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03020 RNA polymerase 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03020 RNA polymerase 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5717327 844091 100809212 101252792 4331821 100285438 103863718 100266448 18100336 25486508 123098648 123093371 123084720 123449605 107901062 107952189 106445025 106435497 110431753 102605923 102615710 100837823 107823207 107784770
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