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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1  CHLRE_03g184050v5  uncharacterized protein 
 ath-u.5  POP4  ribonuclease P family protein 
 gma-u.5  100802747  ribonuclease P protein subunit p29 
 gma-u.5  100795942  ribonuclease P protein subunit p29 
 sly-u.5  101255622  ribonuclease MRP protein subunit POP4 
 osa-u.5  4339079  ribonuclease MRP protein subunit POP4 
 zma-u.5  103631143  uncharacterized LOC103631143 
 zma-u.5  103630287  ribonuclease P protein subunit p29 
 zma-u.5  100274475  uncharacterized LOC100274475 
 bra-r.6  103866705  uncharacterized LOC103866705 
 vvi-u.5  100258470  ribonuclease MRP protein subunit POP4 
 ppo-u.5  7476826  ribonuclease MRP protein subunit POP4 
 mtr-u.5  11437421  ribonuclease P protein subunit p29 
 mtr-u.5  112421681  ribonuclease P protein subunit p29 
 tae-r.2  123182345  ribonuclease P protein subunit p29 
 tae-r.2  123182344  ribonuclease P protein subunit p29 
 tae-r.2  123059893  uncharacterized LOC123059893 
 hvu-r.1  123444863  ribonuclease P protein subunit p29-like 
 ghi-r.1  121202837  uncharacterized LOC121202837 
 ghi-r.1  107905282  uncharacterized LOC107905282 
 bna-r.1  106391291  ribonuclease MRP protein subunit POP4-like 
 bna-r.1  106421121  ribonuclease MRP protein subunit POP4 
 sbi-r.1  110431010  uncharacterized LOC110431010 
 sbi-r.1  8061802  uncharacterized LOC8061802 
 sot-r.1  102601211  ribonuclease P protein subunit p29-like 
 sot-r.1  102584232  uncharacterized LOC102584232 
 cit-r.1  102620832  ribonuclease MRP protein subunit POP4 
 bdi-r.1  100827157  ribonuclease P protein subunit p29 
 bdi-r.1  100828026  ribonuclease P protein subunit p29 
 nta-r.1  107826967  ribonuclease MRP protein subunit POP4 
 nta-r.1  107788410  ribonuclease MRP protein subunit POP4-like 
 nta-r.1  107814246  ribonuclease MRP protein subunit POP4 

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Top 50 coexpressed genes to CHLRE_03g184050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g184050v5 (cre-r.1 coexpression data)

CoexMap"5717411"


creCHLRE_03g184050v5 | Entrez gene ID : 5717411
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 3 1 1 1 2 3 1 2 2 2 2 1 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001682 [list] [network] tRNA 5'-leader removal  (5 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0000172 [list] [network] ribonuclease MRP complex  (3 genes)  IEA  
GO:0030677 [list] [network] ribonuclease P complex  (5 genes)  IEA  
GO MF
GO:0033204 [list] [network] ribonuclease P RNA binding  (1 genes)  IEA  
Protein XP_042926212.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1  (predict for XP_042926212.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_042926212.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cre-r.1
for
CHLRE_03g184050v5


ath-u.5
for
POP4


gma-u.5
for
100802747


gma-u.5
for
100795942


sly-u.5
for
101255622


osa-u.5
for
4339079


zma-u.5
for
103631143


zma-u.5
for
103630287


zma-u.5
for
100274475


bra-r.6
for
103866705


vvi-u.5
for
100258470


ppo-u.5
for
7476826


mtr-u.5
for
11437421


mtr-u.5
for
112421681


tae-r.2
for
123182345


tae-r.2
for
123182344


tae-r.2
for
123059893


hvu-r.1
for
123444863


ghi-r.1
for
121202837


ghi-r.1
for
107905282


bna-r.1
for
106391291


bna-r.1
for
106421121


sbi-r.1
for
110431010


sbi-r.1
for
8061802


sot-r.1
for
102601211


sot-r.1
for
102584232


cit-r.1
for
102620832


bdi-r.1
for
100827157


bdi-r.1
for
100828026


nta-r.1
for
107826967


nta-r.1
for
107788410


nta-r.1
for
107814246



Ortholog ID: 6247
Species cre ath gma gma sly osa zma zma zma bra vvi ppo mtr mtr tae tae tae hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta nta
Symbol CHLRE_03g184050v5 POP4 LOC100802747 LOC100795942 LOC101255622 LOC4339079 LOC103631143 LOC103630287 LOC100274475 LOC103866705 LOC100258470 LOC7476826 LOC11437421 LOC112421681 LOC123182345 LOC123182344 LOC123136790 LOC123444863 LOC121202837 LOC107905282 LOC106391291 LOC106421121 LOC110431010 LOC8061802 LOC102601211 LOC102584232 LOC102620832 LOC100827157 LOC100828026 LOC107826967 LOC107814246 LOC107779920
Function* uncharacterized protein ribonuclease P family protein ribonuclease P protein subunit p29 ribonuclease P protein subunit p29 ribonuclease MRP protein subunit POP4 ribonuclease MRP protein subunit POP4 uncharacterized LOC103631143 ribonuclease P protein subunit p29 uncharacterized LOC100274475 uncharacterized LOC103866705 ribonuclease MRP protein subunit POP4 ribonuclease MRP protein subunit POP4 ribonuclease P protein subunit p29 ribonuclease P protein subunit p29 ribonuclease P protein subunit p29 ribonuclease P protein subunit p29 ribonuclease P protein subunit p29 ribonuclease P protein subunit p29-like uncharacterized LOC121202837 uncharacterized LOC107905282 ribonuclease MRP protein subunit POP4-like ribonuclease MRP protein subunit POP4 uncharacterized LOC110431010 uncharacterized LOC8061802 ribonuclease P protein subunit p29-like uncharacterized LOC102584232 ribonuclease MRP protein subunit POP4 ribonuclease P protein subunit p29 ribonuclease P protein subunit p29 ribonuclease MRP protein subunit POP4 ribonuclease MRP protein subunit POP4 uncharacterized LOC107779920
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 5
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr00760 Nicotinate and nicotinamide metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03250 Viral life cycle - HIV-1 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5717411 818920 100802747 100795942 101255622 4339079 103631143 103630287 100274475 103866705 100258470 7476826 11437421 112421681 123182345 123182344 123136790 123444863 121202837 107905282 106391291 106421121 110431010 8061802 102601211 102584232 102620832 100827157 100828026 107826967 107814246 107779920
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