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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g186900v5   uncharacterized protein 
 ath-u.5   BNS   bonsai 
 gma-u.5   100779178   anaphase-promoting complex subunit 13 
 gma-u.5   100527611   anaphase-promoting complex subunit 13 
 osa-u.5   4344013   anaphase-promoting complex subunit 13 
 zma-u.5   100193267   uncharacterized LOC100193267 
 bra-r.6   103830766   anaphase-promoting complex subunit 13 
 ppo-u.5   7476335   anaphase-promoting complex subunit 13 
 ppo-u.5   7472299   anaphase-promoting complex subunit 13 
 mtr-u.5   11442064   anaphase-promoting complex subunit 13 
 tae-r.2   123187843   anaphase-promoting complex subunit 13 
 tae-r.2   123051963   anaphase-promoting complex subunit 13 
 tae-r.2   123044090   anaphase-promoting complex subunit 13 
 hvu-r.1   123425160   anaphase-promoting complex subunit 13 
 ghi-r.1   107893823   anaphase-promoting complex subunit 13 
 ghi-r.1   107918582   anaphase-promoting complex subunit 13 
 bna-r.1   106406434   anaphase-promoting complex subunit 13 
 bna-r.1   111210229   anaphase-promoting complex subunit 13 
 sbi-r.1   8063524   anaphase-promoting complex subunit 13 
 sot-r.1   102586082   uncharacterized LOC102586082 
 cit-r.1   102607947   anaphase-promoting complex subunit 13 
 bdi-r.1   100829266   anaphase-promoting complex subunit 13 

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Top 50 coexpressed genes to CHLRE_03g186900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g186900v5 (cre-r.1 coexpression data)

CoexMap"5717463"


creCHLRE_03g186900v5 | Entrez gene ID : 5717463      
Species cre ath gma osa zma bra ppo mtr tae hvu ghi bna sbi sot cit bdi nta vvi sly
Paralog 1 1 2 1 1 1 2 1 3 1 2 2 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04120 [list] [network] Ubiquitin mediated proteolysis (48 genes)
GO BP
GO:0070979 [list] [network] protein K11-linked ubiquitination  (5 genes)  IEA  
GO CC
GO:0005680 [list] [network] anaphase-promoting complex  (10 genes)  IEA  
GO MF
Protein XP_001691845.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cysk 2,  nucl 1  (predict for XP_001691845.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for XP_001691845.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g186900v5
ath-u.5
for
BNS
gma-u.5
for
100779178
gma-u.5
for
100527611
osa-u.5
for
4344013
zma-u.5
for
100193267
bra-r.6
for
103830766
ppo-u.5
for
7476335
ppo-u.5
for
7472299
mtr-u.5
for
11442064
tae-r.2
for
123187843
tae-r.2
for
123051963
tae-r.2
for
123044090
hvu-r.1
for
123425160
ghi-r.1
for
107893823
ghi-r.1
for
107918582
bna-r.1
for
106406434
bna-r.1
for
111210229
sbi-r.1
for
8063524
sot-r.1
for
102586082
cit-r.1
for
102607947
bdi-r.1
for
100829266


Ortholog ID: 11802
Species cre ath gma gma osa zma bra ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi
Symbol CHLRE_03g186900v5 BNS LOC100779178 LOC100527611 LOC4344013 LOC100193267 LOC103830766 LOC7476335 LOC7472299 LOC11442064 LOC123187843 LOC123051963 LOC123044090 LOC123425160 LOC107893823 LOC107918582 LOC106406434 LOC111210229 LOC8063524 LOC102586082 LOC102607947 LOC100829266
Function* uncharacterized protein bonsai anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 uncharacterized LOC100193267 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13 uncharacterized LOC102586082 anaphase-promoting complex subunit 13 anaphase-promoting complex subunit 13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03020 RNA polymerase 3
gma03420 Nucleotide excision repair 3
gma03040 Spliceosome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra00190 Oxidative phosphorylation 2
bra03018 RNA degradation 2
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae03060 Protein export 2
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae03060 Protein export 2
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 5
tae00513 Various types of N-glycan biosynthesis 5
tae04141 Protein processing in endoplasmic reticulum 5
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 3
ghi00620 Pyruvate metabolism 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi00620 Pyruvate metabolism 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03050 Proteasome 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03050 Proteasome 6
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00030 Pentose phosphate pathway 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 7
sot04144 Endocytosis 3
sot04141 Protein processing in endoplasmic reticulum 3
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
bdi04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5717463 843651 100779178 100527611 4344013 100193267 103830766 7476335 7472299 11442064 123187843 123051963 123044090 123425160 107893823 107918582 106406434 111210229 8063524 102586082 102607947 100829266
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