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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_04g229350v5   uncharacterized protein 
 ath-u.5   SBI1   Leucine carboxyl methyltransferase 
 gma-u.5   100818890   leucine carboxyl methyltransferase 1 homolog 
 gma-u.5   100801193   leucine carboxyl methyltransferase 1 homolog 
 sly-u.5   101257704   leucine carboxyl methyltransferase 1 homolog 
 osa-u.5   4340066   leucine carboxyl methyltransferase 1 homolog 
 zma-u.5   100282206   uncharacterized LOC100282206 
 bra-r.6   103843828   leucine carboxyl methyltransferase 1 homolog 
 vvi-u.5   100251361   leucine carboxyl methyltransferase 1 homolog 
 ppo-u.5   18105061   leucine carboxyl methyltransferase 1 homolog 
 mtr-u.5   25498937   leucine carboxyl methyltransferase 1 homolog 
 tae-r.2   123150831   leucine carboxyl methyltransferase 1 homolog 
 tae-r.2   123164070   leucine carboxyl methyltransferase 1 homolog 
 tae-r.2   123087935   leucine carboxyl methyltransferase 1 homolog 
 hvu-r.1   123413516   leucine carboxyl methyltransferase 1 homolog 
 ghi-r.1   107937420   leucine carboxyl methyltransferase 1 homolog 
 ghi-r.1   107926120   leucine carboxyl methyltransferase 1 homolog 
 ghi-r.1   107889360   leucine carboxyl methyltransferase 1 homolog 
 bna-r.1   106434151   leucine carboxyl methyltransferase 1 homolog 
 bna-r.1   106426033   leucine carboxyl methyltransferase 1 homolog 
 sbi-r.1   8070707   leucine carboxyl methyltransferase 1 
 sot-r.1   102598619   tRNA wybutosine-synthesizing protein 4 
 cit-r.1   102627581   leucine carboxyl methyltransferase 1 homolog 
 bdi-r.1   100830236   leucine carboxyl methyltransferase 1 homolog 
 nta-r.1   107827637   leucine carboxyl methyltransferase 1 homolog 
 nta-r.1   107765344   leucine carboxyl methyltransferase 1 homolog 

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Top 50 coexpressed genes to CHLRE_04g229350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g229350v5 (cre-r.1 coexpression data)

CoexMap"5717830"


creCHLRE_04g229350v5 | Entrez gene ID : 5717830      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 3 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032259 [list] [network] methylation  (124 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (194 genes)  IEA  
Protein XP_042925428.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 2,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_042925428.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042925428.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_04g229350v5
ath-u.5
for
SBI1
gma-u.5
for
100818890
gma-u.5
for
100801193
sly-u.5
for
101257704
osa-u.5
for
4340066
zma-u.5
for
100282206
bra-r.6
for
103843828
vvi-u.5
for
100251361
ppo-u.5
for
18105061
mtr-u.5
for
25498937
tae-r.2
for
123150831
tae-r.2
for
123164070
tae-r.2
for
123087935
hvu-r.1
for
123413516
ghi-r.1
for
107937420
ghi-r.1
for
107926120
ghi-r.1
for
107889360
bna-r.1
for
106434151
bna-r.1
for
106426033
sbi-r.1
for
8070707
sot-r.1
for
102598619
cit-r.1
for
102627581
bdi-r.1
for
100830236
nta-r.1
for
107827637
nta-r.1
for
107765344


Ortholog ID: 9767
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_04g229350v5 SBI1 LOC100818890 LOC100801193 LOC101257704 LOC4340066 LOC100282206 LOC103843828 LOC100251361 LOC18105061 LOC25498937 LOC123150831 LOC123164070 LOC123087935 LOC123413516 LOC107937420 LOC107926120 LOC107889360 LOC106434151 LOC106426033 LOC8070707 LOC102598619 LOC102627581 LOC100830236 LOC107827637 LOC107765344
Function* uncharacterized protein Leucine carboxyl methyltransferase leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog uncharacterized LOC100282206 leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 tRNA wybutosine-synthesizing protein 4 leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog leucine carboxyl methyltransferase 1 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00440 Phosphonate and phosphinate metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa04145 Phagosome 6
osa03050 Proteasome 5
osa04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03022 Basal transcription factors 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 14
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 5
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 12
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03040 Spliceosome 2
bna03050 Proteasome 2
bna03015 mRNA surveillance pathway 2
bna04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04382 Cornified envelope formation 6
bna03050 Proteasome 3
bna00040 Pentose and glucuronate interconversions 2
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5717830 837541 100818890 100801193 101257704 4340066 100282206 103843828 100251361 18105061 25498937 123150831 123164070 123087935 123413516 107937420 107926120 107889360 106434151 106426033 8070707 102598619 102627581 100830236 107827637 107765344
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