ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_07g344000v5	uncharacterized protein
cre-r.1	CHLRE_17g744297v5	uncharacterized protein
ath-u.5	AT4G34215	carbohydrate esterase, putative (DUF303)
gma-u.5	100793278	probable carbohydrate esterase At4g34215
gma-u.5	100808248	probable carbohydrate esterase At4g34215
sly-u.5	101259519	probable carbohydrate esterase At4g34215
osa-u.5	4334846	probable carbohydrate esterase At4g34215
osa-u.5	4334847	probable carbohydrate esterase At4g34215
osa-u.5	4335355	probable carbohydrate esterase At4g34215
zma-u.5	103632302	probable carbohydrate esterase At4g34215
zma-u.5	111590294	probable carbohydrate esterase At4g34215
zma-u.5	100217031	uncharacterized LOC100217031
bra-r.6	103840660	probable carbohydrate esterase At4g34215
vvi-u.5	100260676	probable carbohydrate esterase At4g34215
ppo-u.5	7465039	probable carbohydrate esterase At4g34215
ppo-u.5	7457555	probable carbohydrate esterase At4g34215
ppo-u.5	18104836	probable carbohydrate esterase At4g34215
mtr-u.5	120577856	probable carbohydrate esterase At4g34215
mtr-u.5	11435162	probable carbohydrate esterase At4g34215
mtr-u.5	11429852	probable carbohydrate esterase At4g34215
tae-r.2	123043221	probable carbohydrate esterase At4g34215
tae-r.2	123123930	probable carbohydrate esterase At4g34215
tae-r.2	123188920	probable carbohydrate esterase At4g34215
hvu-r.1	123426399	probable carbohydrate esterase At4g34215
hvu-r.1	123424392	probable carbohydrate esterase At4g34215
hvu-r.1	123410855	probable carbohydrate esterase At4g34215
ghi-r.1	121229025	probable carbohydrate esterase At4g34215
ghi-r.1	107934153	probable carbohydrate esterase At4g34215
bna-r.1	106396163	probable carbohydrate esterase At4g34215
bna-r.1	106357332	probable carbohydrate esterase At4g34215
sbi-r.1	8061653	probable carbohydrate esterase At4g34215
sbi-r.1	8059251	probable carbohydrate esterase At4g34215
sbi-r.1	8086462	probable carbohydrate esterase At4g34215
sot-r.1	102583796	probable carbohydrate esterase At4g34215
cit-r.1	102620540	probable carbohydrate esterase At4g34215
cit-r.1	102609328	probable carbohydrate esterase At4g34215
bdi-r.1	100841683	probable carbohydrate esterase At4g34215
bdi-r.1	100828054	probable carbohydrate esterase At4g34215
nta-r.1	107810471	putative carbohydrate esterase At4g34215

Top 50 coexpressed genes to CHLRE_07g344000v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_07g344000v5 (cre-r.1 coexpression data)

CoexMap"5718009"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042922981.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_042922981.1)

Subcellular
localization
TargetP

other 6, chlo 4

(predict for XP_042922981.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_07g344000v5	cre-r.1 for CHLRE_17g744297v5	ath-u.5 for AT4G34215	gma-u.5 for 100793278	gma-u.5 for 100808248	sly-u.5 for 101259519	osa-u.5 for 4334846	osa-u.5 for 4334847	osa-u.5 for 4335355	zma-u.5 for 103632302	zma-u.5 for 111590294	zma-u.5 for 100217031	bra-r.6 for 103840660	vvi-u.5 for 100260676	ppo-u.5 for 7465039	ppo-u.5 for 7457555	ppo-u.5 for 18104836	mtr-u.5 for 120577856	mtr-u.5 for 11435162	mtr-u.5 for 11429852	tae-r.2 for 123043221	tae-r.2 for 123123930	tae-r.2 for 123188920	hvu-r.1 for 123426399	hvu-r.1 for 123424392	hvu-r.1 for 123410855	ghi-r.1 for 121229025	ghi-r.1 for 107934153	bna-r.1 for 106396163	bna-r.1 for 106357332	sbi-r.1 for 8061653	sbi-r.1 for 8059251	sbi-r.1 for 8086462	sot-r.1 for 102583796	cit-r.1 for 102620540	cit-r.1 for 102609328	bdi-r.1 for 100841683	bdi-r.1 for 100828054	nta-r.1 for 107810471

Ortholog

Ortholog ID: 539

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

Symbol

Function^*

uncharacterized protein

carbohydrate esterase, putative (DUF303)

probable carbohydrate esterase At4g34215

uncharacterized LOC100284547

receptor protein kinase-like protein

probable carbohydrate esterase At4g34215

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2
ath00071	Fatty acid degradation	2
ath01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	2
gma00561	Glycerolipid metabolism	2
gma00600	Sphingolipid metabolism	2
gma00603	Glycosphingolipid biosynthesis - globo and isoglobo series	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01250	Biosynthesis of nucleotide sugars	4
gma00520	Amino sugar and nucleotide sugar metabolism	3
gma00541	Biosynthesis of various nucleotide sugars	3
gma00040	Pentose and glucuronate interconversions	2
gma00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2
sly00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00592	alpha-Linolenic acid metabolism	3
zma00350	Tyrosine metabolism	2
zma00950	Isoquinoline alkaloid biosynthesis	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	4
bra00020	Citrate cycle (TCA cycle)	3
bra00270	Cysteine and methionine metabolism	3
bra00566	Sulfoquinovose metabolism	3
bra00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	4
ppo00940	Phenylpropanoid biosynthesis	3
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ppo01230	Biosynthesis of amino acids	2
ppo00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	4
hvu00010	Glycolysis / Gluconeogenesis	3
hvu00620	Pyruvate metabolism	3
hvu00190	Oxidative phosphorylation	3
hvu00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4
ghi01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00100	Steroid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

5718009

66057200

829570

100808248

100814340

101253693

4334846

4335355

9270069

111590294

100284547

100280606

103840660

100260676

7457555

18104836

18104835

120577856

11419176

25485420

123151375

123083528

123426399

123424392

123407721

121217886

107905607

107928912

106396163

106357332

8059251

8065963

8059252

107060244

102578515

102620540

102609328

100828054

100839059

The preparation time of this page was 0.3 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	2	1	2	1	3	3	1	1	3	3	3	3	2	2	3	1	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_07g344000v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_07g344000v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**