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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g344350v5   uncharacterized protein 
 ath-u.5   PLSP1   plastidic type i signal peptidase 1 
 gma-u.5   100815810   chloroplast processing peptidase 
 gma-u.5   100785296   chloroplast processing peptidase 
 sly-u.5   101250277   chloroplast processing peptidase 
 osa-u.5   4328965   chloroplast processing peptidase 
 zma-u.5   103626952   chloroplast processing peptidase 
 bra-r.6   103828617   chloroplast processing peptidase 
 vvi-u.5   100252527   chloroplast processing peptidase 
 ppo-u.5   7458769   chloroplast processing peptidase 
 ppo-u.5   18100415   chloroplast processing peptidase 
 mtr-u.5   11417003   chloroplast processing peptidase 
 tae-r.2   123149645   chloroplast processing peptidase 
 tae-r.2   123160334   chloroplast processing peptidase 
 tae-r.2   123168003   chloroplast processing peptidase 
 hvu-r.1   123411121   chloroplast processing peptidase-like 
 ghi-r.1   107907208   chloroplast processing peptidase 
 ghi-r.1   107958757   chloroplast processing peptidase 
 bna-r.1   106451704   chloroplast processing peptidase 
 bna-r.1   106436604   chloroplast processing peptidase-like 
 sbi-r.1   8080371   chloroplast processing peptidase 
 sot-r.1   102594463   chloroplast processing peptidase 
 cit-r.1   102620156   chloroplast processing peptidase 
 bdi-r.1   100828102   chloroplast processing peptidase 
 nta-r.1   107824580   chloroplast processing peptidase 
 nta-r.1   107799582   chloroplast processing peptidase 
 nta-r.1   107795000   chloroplast processing peptidase 

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Top 50 coexpressed genes to CHLRE_07g344350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g344350v5 (cre-r.1 coexpression data)

CoexMap"5718127"


creCHLRE_07g344350v5 | Entrez gene ID : 5718127      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 2 1 3 1 2 2 1 1 1 1 3
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03060 [list] [network] Protein export (34 genes)
GO BP
GO:0006465 [list] [network] signal peptide processing  (9 genes)  IEA  
GO:0010027 [list] [network] thylakoid membrane organization  (10 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (43 genes)  IEA  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (85 genes)  IEA  
Protein XP_001692428.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 3  (predict for XP_001692428.2)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for XP_001692428.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g344350v5
ath-u.5
for
PLSP1
gma-u.5
for
100815810
gma-u.5
for
100785296
sly-u.5
for
101250277
osa-u.5
for
4328965
zma-u.5
for
103626952
bra-r.6
for
103828617
vvi-u.5
for
100252527
ppo-u.5
for
7458769
ppo-u.5
for
18100415
mtr-u.5
for
11417003
tae-r.2
for
123149645
tae-r.2
for
123160334
tae-r.2
for
123168003
hvu-r.1
for
123411121
ghi-r.1
for
107907208
ghi-r.1
for
107958757
bna-r.1
for
106451704
bna-r.1
for
106436604
sbi-r.1
for
8080371
sot-r.1
for
102594463
cit-r.1
for
102620156
bdi-r.1
for
100828102
nta-r.1
for
107824580
nta-r.1
for
107799582
nta-r.1
for
107795000


Ortholog ID: 8028
Species cre ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_07g344350v5 PLSP1 LOC100815810 LOC100785296 LOC101250277 LOC4328965 LOC103626952 LOC103828617 LOC100252527 LOC7458769 LOC18100415 LOC11417003 LOC123149645 LOC123160334 LOC123168003 LOC123411121 LOC107907208 LOC107958757 LOC106451704 LOC106436604 LOC8080371 LOC102594463 LOC102620156 LOC100828102 LOC107799582 LOC107795000 LOC107783853
Function* uncharacterized protein plastidic type i signal peptidase 1 chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase-like chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase-like chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase chloroplast processing peptidase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma01240 Biosynthesis of cofactors 3
gma03060 Protein export 2
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03060 Protein export 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03018 RNA degradation 2
bra00860 Porphyrin metabolism 2
bra01240 Biosynthesis of cofactors 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00053 Ascorbate and aldarate metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
tae03060 Protein export 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
bna00906 Carotenoid biosynthesis 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
bna00906 Carotenoid biosynthesis 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03060 Protein export 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 4
cit01240 Biosynthesis of cofactors 3
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03060 Protein export 2
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03060 Protein export 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718127 822055 100815810 100785296 101250277 4328965 103626952 103828617 100252527 7458769 18100415 11417003 123149645 123160334 123168003 123411121 107907208 107958757 106451704 106436604 8080371 102594463 102620156 100828102 107799582 107795000 107783853
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