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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g346800v5   uncharacterized protein 
 ath-u.5   AT5G48440   FAD-dependent oxidoreductase family protein 
 gma-u.5   100802485   glycine oxidase 
 sly-u.5   101255236   uncharacterized LOC101255236 
 osa-u.5   4347563   glycine oxidase 
 zma-u.5   100281203   uncharacterized LOC100281203 
 bra-r.6   103874958   glycine oxidase 
 vvi-u.5   100251626   uncharacterized LOC100251626 
 ppo-u.5   18104799   uncharacterized LOC18104799 
 ppo-u.5   7469380   uncharacterized LOC7469380 
 mtr-u.5   11442670   D-amino acid dehydrogenase 
 tae-r.2   123122165   glycine oxidase 
 tae-r.2   123112674   glycine oxidase 
 tae-r.2   123104389   glycine oxidase 
 hvu-r.1   123399883   glycine oxidase 
 ghi-r.1   107923218   D-amino acid dehydrogenase 
 ghi-r.1   107912512   glycine oxidase 
 bna-r.1   106368009   glycine oxidase 
 bna-r.1   106348989   glycine oxidase 
 sbi-r.1   8058997   glycine oxidase 
 sot-r.1   102606290   glycine oxidase 
 cit-r.1   102621930   uncharacterized LOC102621930 
 bdi-r.1   100823913   glycine oxidase 
 nta-r.1   107775405   uncharacterized LOC107775405 
 nta-r.1   107794390   uncharacterized LOC107794390 

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Top 50 coexpressed genes to CHLRE_07g346800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g346800v5 (cre-r.1 coexpression data)

CoexMap"5718147"


creCHLRE_07g346800v5 | Entrez gene ID : 5718147    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (596 genes)  IEA  
Protein XP_042923047.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_042923047.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_042923047.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g346800v5
ath-u.5
for
AT5G48440
gma-u.5
for
100802485
sly-u.5
for
101255236
osa-u.5
for
4347563
zma-u.5
for
100281203
bra-r.6
for
103874958
vvi-u.5
for
100251626
ppo-u.5
for
18104799
ppo-u.5
for
7469380
mtr-u.5
for
11442670
tae-r.2
for
123122165
tae-r.2
for
123112674
tae-r.2
for
123104389
hvu-r.1
for
123399883
ghi-r.1
for
107923218
ghi-r.1
for
107912512
bna-r.1
for
106368009
bna-r.1
for
106348989
sbi-r.1
for
8058997
sot-r.1
for
102606290
cit-r.1
for
102621930
bdi-r.1
for
100823913
nta-r.1
for
107775405
nta-r.1
for
107794390


Ortholog ID: 10370
Species cre ath gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_07g346800v5 AT5G48440 LOC100802485 LOC101255236 LOC4347563 LOC100281203 LOC103874958 LOC100251626 LOC18104799 LOC7469380 LOC11442670 LOC123122165 LOC123112674 LOC123104389 LOC123399883 LOC107923218 LOC107912512 LOC106368009 LOC106348989 LOC8058997 LOC102606290 LOC102621930 LOC100823913 LOC107775405 LOC107794390
Function* uncharacterized protein FAD-dependent oxidoreductase family protein glycine oxidase uncharacterized LOC101255236 glycine oxidase uncharacterized LOC100281203 glycine oxidase uncharacterized LOC100251626 uncharacterized LOC18104799 uncharacterized LOC7469380 D-amino acid dehydrogenase glycine oxidase glycine oxidase glycine oxidase glycine oxidase D-amino acid dehydrogenase glycine oxidase glycine oxidase glycine oxidase glycine oxidase glycine oxidase uncharacterized LOC102621930 glycine oxidase uncharacterized LOC107775405 uncharacterized LOC107794390
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 3
gma01200 Carbon metabolism 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00500 Starch and sucrose metabolism 4
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 2
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 3
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 3
tae00902 Monoterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 3
tae00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 3
ghi00513 Various types of N-glycan biosynthesis 3
ghi04141 Protein processing in endoplasmic reticulum 3
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00500 Starch and sucrose metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 4
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00071 Fatty acid degradation 2
bdi00350 Tyrosine metabolism 2
bdi00592 alpha-Linolenic acid metabolism 2
bdi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718147 834899 100802485 101255236 4347563 100281203 103874958 100251626 18104799 7469380 11442670 123122165 123112674 123104389 123399883 107923218 107912512 106368009 106348989 8058997 102606290 102621930 100823913 107775405 107794390
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