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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g350450v5   uncharacterized protein 
 osa-u.5   4327771   RING-H2 finger protein ATL79 
 osa-u.5   107278685   uncharacterized LOC107278685 
 zma-u.5   109941568   RING-H2 finger protein ATL64 
 zma-u.5   103630232   E3 ubiquitin-protein ligase EL5 
 tae-r.2   123169302   E3 ubiquitin-protein ligase EL5 
 hvu-r.1   123412271   RING-H2 finger protein ATL2-like 
 sbi-r.1   8061911   E3 ubiquitin-protein ligase EL5 
 bdi-r.1   100830716   RING-H2 finger protein ATL39 

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Top 50 coexpressed genes to CHLRE_07g350450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g350450v5 (cre-r.1 coexpression data)

CoexMap"5718180"


creCHLRE_07g350450v5 | Entrez gene ID : 5718180      
Species cre osa zma tae hvu sbi bdi gma cit sly sot mtr bra ath bna ppo vvi ghi nta
Paralog 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036297 [list] [network] interstrand cross-link repair  (10 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (136 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (65 genes)  IEA  
Protein XP_042923116.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  pero 1  (predict for XP_042923116.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042923116.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g350450v5
osa-u.5
for
4327771
osa-u.5
for
107278685
zma-u.5
for
109941568
zma-u.5
for
103630232
tae-r.2
for
123169302
hvu-r.1
for
123412271
sbi-r.1
for
8061911
bdi-r.1
for
100830716


Ortholog ID: 11573
Species cre osa osa zma zma zma tae tae hvu sbi bdi
Symbol CHLRE_07g350450v5 LOC4327771 LOC107278685 LOC109941568 LOC103630232 LOC100285970 LOC123169302 LOC123092289 LOC123412271 LOC8061911 LOC100830716
Function* uncharacterized protein RING-H2 finger protein ATL79 uncharacterized LOC107278685 RING-H2 finger protein ATL64 E3 ubiquitin-protein ligase EL5 zinc finger, C3HC4 type family protein E3 ubiquitin-protein ligase EL5 RING-H2 finger protein ATL2 RING-H2 finger protein ATL2-like E3 ubiquitin-protein ligase EL5 RING-H2 finger protein ATL39
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 5
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 5
osa00195 Photosynthesis 3
osa00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718180 4327771 107278685 109941568 103630232 100285970 123169302 123092289 123412271 8061911 100830716
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