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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g193350v5   uncharacterized protein 
 ath-u.5   IBR5   indole-3-butyric acid response 5 
 gma-u.5   100808721   protein-tyrosine-phosphatase IBR5 
 gma-u.5   100806021   protein-tyrosine-phosphatase IBR5 
 sly-u.5   101267250   protein-tyrosine-phosphatase IBR5 
 sly-u.5   101252462   protein-tyrosine-phosphatase IBR5 
 osa-u.5   4340847   protein-tyrosine-phosphatase IBR5 
 osa-u.5   4330549   protein-tyrosine-phosphatase IBR5 
 zma-u.5   100285227   uncharacterized LOC100285227 
 zma-u.5   100285381   dual specificity protein phosphatase 4 
 bra-r.6   103828529   protein-tyrosine-phosphatase IBR5 
 bra-r.6   103860307   protein-tyrosine-phosphatase IBR5 
 vvi-u.5   100249965   protein-tyrosine-phosphatase IBR5 
 ppo-u.5   7455681   protein-tyrosine-phosphatase IBR5 
 mtr-u.5   11420754   protein-tyrosine-phosphatase IBR5 
 tae-r.2   123145315   protein-tyrosine-phosphatase IBR5 
 tae-r.2   123150498   protein-tyrosine-phosphatase IBR5 
 hvu-r.1   123402502   protein-tyrosine-phosphatase IBR5-like 
 hvu-r.1   123407850   protein-tyrosine-phosphatase IBR5-like 
 ghi-r.1   107955048   protein-tyrosine-phosphatase IBR5 
 ghi-r.1   107955728   protein-tyrosine-phosphatase IBR5 
 ghi-r.1   121232141   protein-tyrosine-phosphatase IBR5 
 bna-r.1   106357784   protein-tyrosine-phosphatase IBR5-like 
 bna-r.1   106410951   protein-tyrosine-phosphatase IBR5 
 bna-r.1   106361829   protein-tyrosine-phosphatase IBR5 
 sbi-r.1   8072850   protein-tyrosine-phosphatase IBR5 
 sbi-r.1   8071772   protein-tyrosine-phosphatase IBR5 
 sot-r.1   102579669   protein-tyrosine-phosphatase IBR5-like 
 sot-r.1   102582090   protein-tyrosine-phosphatase IBR5-like 
 cit-r.1   102631010   protein-tyrosine-phosphatase IBR5 
 bdi-r.1   100843241   protein-tyrosine-phosphatase IBR5 
 bdi-r.1   100842961   protein-tyrosine-phosphatase IBR5 
 nta-r.1   107801872   protein-tyrosine-phosphatase IBR5 
 nta-r.1   107798553   protein-tyrosine-phosphatase IBR5 
 nta-r.1   107792546   protein-tyrosine-phosphatase IBR5 

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Top 50 coexpressed genes to CHLRE_03g193350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g193350v5 (cre-r.1 coexpression data)

CoexMap"5718699"


creCHLRE_03g193350v5 | Entrez gene ID : 5718699      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 2 2 2 2 1 1 1 2 2 3 3 2 2 1 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04148 [list] [network] Efferocytosis (19 genes)
GO BP
GO:0009734 [list] [network] auxin-activated signaling pathway  (1 genes)  IEA  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (1 genes)  IEA  
GO:0043407 [list] [network] negative regulation of MAP kinase activity  (1 genes)  IEA  
GO:0006470 [list] [network] protein dephosphorylation  (54 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0033549 [list] [network] MAP kinase phosphatase activity  (4 genes)  IEA  
GO:0008138 [list] [network] protein tyrosine/serine/threonine phosphatase activity  (15 genes)  IEA  
Protein XP_001693255.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_001693255.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001693255.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g193350v5
ath-u.5
for
IBR5
gma-u.5
for
100808721
gma-u.5
for
100806021
sly-u.5
for
101267250
sly-u.5
for
101252462
osa-u.5
for
4340847
osa-u.5
for
4330549
zma-u.5
for
100285227
zma-u.5
for
100285381
bra-r.6
for
103828529
bra-r.6
for
103860307
vvi-u.5
for
100249965
ppo-u.5
for
7455681
mtr-u.5
for
11420754
tae-r.2
for
123145315
tae-r.2
for
123150498
hvu-r.1
for
123402502
hvu-r.1
for
123407850
ghi-r.1
for
107955048
ghi-r.1
for
107955728
ghi-r.1
for
121232141
bna-r.1
for
106357784
bna-r.1
for
106410951
bna-r.1
for
106361829
sbi-r.1
for
8072850
sbi-r.1
for
8071772
sot-r.1
for
102579669
sot-r.1
for
102582090
cit-r.1
for
102631010
bdi-r.1
for
100843241
bdi-r.1
for
100842961
nta-r.1
for
107801872
nta-r.1
for
107798553
nta-r.1
for
107792546


Ortholog ID: 4335
Species cre ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot cit bdi bdi nta nta nta
Symbol CHLRE_03g193350v5 IBR5 LOC100808721 LOC100806021 LOC101267250 LOC101252462 LOC4340847 LOC4330549 LOC100285227 LOC100285381 LOC103828529 LOC103860307 LOC100249965 LOC7455681 LOC11420754 LOC123145315 LOC123156251 LOC123164991 LOC123402502 LOC123407850 LOC107955728 LOC121232141 LOC107922733 LOC106357784 LOC106410951 LOC111210588 LOC8072850 LOC8071772 LOC102579669 LOC102582090 LOC102631010 LOC100843241 LOC100842961 LOC107801872 LOC107798553 LOC107769123
Function* uncharacterized protein indole-3-butyric acid response 5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 uncharacterized LOC100285227 dual specificity protein phosphatase 4 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma00640 Propanoate metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03020 RNA polymerase 2
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 5
ppo04148 Efferocytosis 2
ppo00310 Lysine degradation 2
ppo01200 Carbon metabolism 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03420 Nucleotide excision repair 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04148 Efferocytosis 3
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04136 Autophagy - other 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta03050 Proteasome 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718699 814997 100808721 100806021 101267250 101252462 4340847 4330549 100285227 100285381 103828529 103860307 100249965 7455681 11420754 123145315 123156251 123164991 123402502 123407850 107955728 121232141 107922733 106357784 106410951 111210588 8072850 8071772 102579669 102582090 102631010 100843241 100842961 107801872 107798553 107769123
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