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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g194450v5   uncharacterized protein 
 ath-u.5   AT1G28100   uncharacterized protein 
 gma-u.5   100306249   protein NEOXANTHIN-DEFICIENT 1 
 sly-u.5   NXD1   Protein NEOXANTHIN-DEFICIENT 1 
 osa-u.5   4349027   protein NEOXANTHIN-DEFICIENT 1-like 
 zma-u.5   100217307   uncharacterized LOC100217307 
 bra-r.6   103829032   protein NEOXANTHIN-DEFICIENT 1 
 ppo-u.5   7482818   protein NEOXANTHIN-DEFICIENT 1 
 ppo-u.5   7481186   protein NEOXANTHIN-DEFICIENT 1 
 mtr-u.5   25487171   protein NEOXANTHIN-DEFICIENT 1 
 tae-r.2   123181225   protein NEOXANTHIN-DEFICIENT 1 
 tae-r.2   123122963   protein NEOXANTHIN-DEFICIENT 1 
 tae-r.2   123047303   protein NEOXANTHIN-DEFICIENT 1 
 hvu-r.1   123433064   protein NEOXANTHIN-DEFICIENT 1 
 ghi-r.1   107909519   protein NEOXANTHIN-DEFICIENT 1 
 ghi-r.1   107952012   protein NEOXANTHIN-DEFICIENT 1 
 bna-r.1   106358048   protein NEOXANTHIN-DEFICIENT 1 
 bna-r.1   106446147   protein NEOXANTHIN-DEFICIENT 1-like 
 sbi-r.1   8067092   protein NEOXANTHIN-DEFICIENT 1 
 sot-r.1   102594860   uncharacterized LOC102594860 
 cit-r.1   102625744   protein NEOXANTHIN-DEFICIENT 1 
 bdi-r.1   100837497   protein NEOXANTHIN-DEFICIENT 1 
 nta-r.1   107764508   protein NEOXANTHIN-DEFICIENT 1 
 nta-r.1   107766995   protein NEOXANTHIN-DEFICIENT 1 

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Top 50 coexpressed genes to CHLRE_03g194450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g194450v5 (cre-r.1 coexpression data)

CoexMap"5718722"


creCHLRE_03g194450v5 | Entrez gene ID : 5718722      
Species cre ath gma sly osa zma bra ppo mtr tae hvu ghi bna sbi sot cit bdi nta vvi
Paralog 1 1 1 1 1 1 1 2 1 3 1 2 2 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_001693267.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  pero 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_001693267.2)
Subcellular
localization
TargetP
other 8  (predict for XP_001693267.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g194450v5
ath-u.5
for
AT1G28100
gma-u.5
for
100306249
sly-u.5
for
NXD1
osa-u.5
for
4349027
zma-u.5
for
100217307
bra-r.6
for
103829032
ppo-u.5
for
7482818
ppo-u.5
for
7481186
mtr-u.5
for
25487171
tae-r.2
for
123181225
tae-r.2
for
123122963
tae-r.2
for
123047303
hvu-r.1
for
123433064
ghi-r.1
for
107909519
ghi-r.1
for
107952012
bna-r.1
for
106358048
bna-r.1
for
106446147
sbi-r.1
for
8067092
sot-r.1
for
102594860
cit-r.1
for
102625744
bdi-r.1
for
100837497
nta-r.1
for
107764508
nta-r.1
for
107766995


Ortholog ID: 9238
Species cre ath gma sly osa zma bra ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g194450v5 AT1G28100 LOC100306249 NXD1 LOC4349027 LOC100217307 LOC103829032 LOC7482818 LOC7481186 LOC25487171 LOC123181225 LOC123122963 LOC123047303 LOC123433064 LOC107909519 LOC107952012 LOC106358048 LOC106446147 LOC8067092 LOC102594860 LOC102625744 LOC100837497 LOC107764508 LOC107766995
Function* uncharacterized protein uncharacterized protein protein NEOXANTHIN-DEFICIENT 1 Protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1-like uncharacterized LOC100217307 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1-like protein NEOXANTHIN-DEFICIENT 1 uncharacterized LOC102594860 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1 protein NEOXANTHIN-DEFICIENT 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 4
cre00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00195 Photosynthesis 2
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa00900 Terpenoid backbone biosynthesis 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 5
hvu00196 Photosynthesis - antenna proteins 3
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 7
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718722 839703 100306249 101248551 4349027 100217307 103829032 7482818 7481186 25487171 123181225 123122963 123047303 123433064 107909519 107952012 106358048 106446147 8067092 102594860 102625744 100837497 107764508 107766995
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