ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_03g195050v5	uncharacterized protein
cre-r.1	CHLRE_17g699900v5	uncharacterized protein
gma-u.5	102666989	protein tas
gma-u.5	100775471	protein tas
sly-u.5	101264672	uncharacterized LOC101264672
osa-u.5	4351019	uncharacterized LOC4351019
zma-u.5	100384034	uncharacterized LOC100384034
vvi-u.5	100244190	uncharacterized LOC100244190
ppo-u.5	7462469	uncharacterized LOC7462469
mtr-u.5	11405216	protein tas
hvu-r.1	123442728	protein tas-like
ghi-r.1	107912390	protein tas
ghi-r.1	107923928	protein tas
sbi-r.1	8058000	protein tas
bdi-r.1	100840354	protein tas
nta-r.1	107800860	uncharacterized LOC107800860
nta-r.1	107785859	uncharacterized LOC107785859

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042926365.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, vacu 1, nucl 1, plas 1, E.R. 1, pero 1, nucl_plas 1, E.R._plas 1

(predict for XP_042926365.1)

Subcellular
localization
TargetP

chlo 2

(predict for XP_042926365.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_03g195050v5	cre-r.1 for CHLRE_17g699900v5	gma-u.5 for 102666989	gma-u.5 for 100775471	sly-u.5 for 101264672	osa-u.5 for 4351019	zma-u.5 for 100384034	vvi-u.5 for 100244190	ppo-u.5 for 7462469	mtr-u.5 for 11405216	hvu-r.1 for 123442728	ghi-r.1 for 107912390	ghi-r.1 for 107923928	sbi-r.1 for 8058000	bdi-r.1 for 100840354	nta-r.1 for 107800860	nta-r.1 for 107785859

Ortholog

Ortholog ID: 12552

Species

cre

gma

sly

osa

zma

vvi

ppo

mtr

hvu

ghi

sbi

bdi

nta

Symbol

Function^*

uncharacterized protein

protein tas

uncharacterized LOC101264672

uncharacterized LOC4351019

uncharacterized LOC100384034

uncharacterized LOC100244190

uncharacterized LOC7462469

protein tas

protein tas-like

protein tas

uncharacterized LOC107800860

uncharacterized LOC107785859

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2
ghi03410	Base excision repair	2
ghi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	4
nta01240	Biosynthesis of cofactors	4
nta00750	Vitamin B6 metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

5718735

5717320

102666989

100775471

101264672

4351019

100384034

100244190

7462469

11405216

123442728

107912390

107923928

8058000

100840354

107800860

107785859

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_03g195050v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_03g195050v5 (cre-r.1 coexpression data)


Species	cre	gma	sly	osa	zma	vvi	ppo	mtr	hvu	ghi	sbi	bdi	nta	bra	ath	bna	tae	cit	sot
Paralog	2	2	1	1	1	1	1	1	1	2	1	1	2	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_03g195050v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_03g195050v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**