ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_03g206950v5	uncharacterized protein
ath-u.5	AT2G19910	RNA-dependent RNA polymerase family protein
ath-u.5	AT2G19920	RNA-dependent RNA polymerase family protein
ath-u.5	AT2G19930	RNA-dependent RNA polymerase family protein
gma-u.5	RDR3	RNA-dependent RNA polymerase
sly-u.5	Ty-1/Ty-3	RNA-dependent RNA polymerase
sly-u.5	101257834	probable RNA-dependent RNA polymerase 5
osa-u.5	4327335	probable RNA-dependent RNA polymerase 3
osa-u.5	4327336	probable RNA-dependent RNA polymerase 4
zma-u.5	103646829	probable RNA-dependent RNA polymerase 3
zma-u.5	100384503	uncharacterized LOC100384503
bra-r.6	103845422	probable RNA-dependent RNA polymerase 3
vvi-u.5	100260997	probable RNA-dependent RNA polymerase 5
ppo-u.5	18100462	probable RNA-dependent RNA polymerase 5
ppo-u.5	18100983	probable RNA-dependent RNA polymerase 5
mtr-u.5	25496960	probable RNA-dependent RNA polymerase 5
mtr-u.5	11411705	probable RNA-dependent RNA polymerase 5
tae-r.2	123060583	probable RNA-dependent RNA polymerase 3
tae-r.2	123060582	probable RNA-dependent RNA polymerase 3
ghi-r.1	107932268	probable RNA-dependent RNA polymerase 5
ghi-r.1	107940156	probable RNA-dependent RNA polymerase 5
bna-r.1	106357580	probable RNA-dependent RNA polymerase 5
bna-r.1	106368929	probable RNA-dependent RNA polymerase 5
sbi-r.1	8066011	probable RNA-dependent RNA polymerase 3
sbi-r.1	8084336	probable RNA-dependent RNA polymerase 3
sot-r.1	102579148	probable RNA-dependent RNA polymerase 5
sot-r.1	102602961	probable RNA-dependent RNA polymerase 5
cit-r.1	102621864	probable RNA-dependent RNA polymerase 3
nta-r.1	107828996	putative RNA-dependent RNA polymerase 5
nta-r.1	107778920	putative RNA-dependent RNA polymerase 3
nta-r.1	107774542	putative RNA-dependent RNA polymerase 5

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003968 [list] [network] RNA-directed RNA polymerase activity

(1 genes)

IEA

Protein

XP_042926454.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_042926454.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_042926454.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_03g206950v5	ath-u.5 for AT2G19910	ath-u.5 for AT2G19920	ath-u.5 for AT2G19930	gma-u.5 for RDR3	sly-u.5 for Ty-1/Ty-3	sly-u.5 for 101257834	osa-u.5 for 4327335	osa-u.5 for 4327336	zma-u.5 for 103646829	zma-u.5 for 100384503	bra-r.6 for 103845422	vvi-u.5 for 100260997	ppo-u.5 for 18100462	ppo-u.5 for 18100983	mtr-u.5 for 25496960	mtr-u.5 for 11411705	tae-r.2 for 123060583	tae-r.2 for 123060582	ghi-r.1 for 107932268	ghi-r.1 for 107940156	bna-r.1 for 106357580	bna-r.1 for 106368929	sbi-r.1 for 8066011	sbi-r.1 for 8084336	sot-r.1 for 102579148	sot-r.1 for 102602961	cit-r.1 for 102621864	nta-r.1 for 107828996	nta-r.1 for 107778920	nta-r.1 for 107774542

Ortholog

Ortholog ID: 2612

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

ghi

bna

sbi

sot

cit

nta

Symbol

RDR3

Function^*

uncharacterized protein

RNA-dependent RNA polymerase family protein

RNA-dependent RNA polymerase

probable RNA-dependent RNA polymerase 5