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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g201050v5   uncharacterized protein 
 ath-u.5   AT3G44020   thylakoid lumenal P17.1 protein 
 gma-u.5   100305836   uncharacterized LOC100305836 
 sly-u.5   101260110   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 osa-u.5   4326942   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 zma-u.5   103636608   protein disulfide-isomerase LQY1, chloroplastic 
 bra-r.6   103848047   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 vvi-u.5   100244480   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ppo-u.5   7478596   protein disulfide-isomerase LQY1, chloroplastic 
 mtr-u.5   11431794   uncharacterized LOC11431794 
 tae-r.2   123062196   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123079316   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123070929   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 hvu-r.1   123444524   protein enabled homolog 
 ghi-r.1   107953145   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107954230   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bna-r.1   106347700   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bna-r.1   111211609   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 sbi-r.1   8072130   protein disulfide-isomerase LQY1, chloroplastic 
 sot-r.1   102602654   protein SPA, chloroplastic 
 cit-r.1   102619544   protein SPA, chloroplastic 
 bdi-r.1   100843465   formin-like protein 5 

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Top 50 coexpressed genes to CHLRE_03g201050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g201050v5 (cre-r.1 coexpression data)

CoexMap"5718924"


creCHLRE_03g201050v5 | Entrez gene ID : 5718924      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042926568.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_042926568.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_042926568.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g201050v5
ath-u.5
for
AT3G44020
gma-u.5
for
100305836
sly-u.5
for
101260110
osa-u.5
for
4326942
zma-u.5
for
103636608
bra-r.6
for
103848047
vvi-u.5
for
100244480
ppo-u.5
for
7478596
mtr-u.5
for
11431794
tae-r.2
for
123062196
tae-r.2
for
123079316
tae-r.2
for
123070929
hvu-r.1
for
123444524
ghi-r.1
for
107953145
ghi-r.1
for
107954230
bna-r.1
for
106347700
bna-r.1
for
111211609
sbi-r.1
for
8072130
sot-r.1
for
102602654
cit-r.1
for
102619544
bdi-r.1
for
100843465


Ortholog ID: 11691
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi
Symbol CHLRE_03g201050v5 AT3G44020 LOC100305836 LOC101260110 LOC4326942 LOC103636608 LOC103848047 LOC100244480 LOC7478596 LOC11431794 LOC123062196 LOC123079316 LOC123070929 LOC123444524 LOC107953145 LOC107954230 LOC106347700 LOC111211609 LOC8072130 LOC102602654 LOC102619544 LOC100843465
Function* uncharacterized protein thylakoid lumenal P17.1 protein uncharacterized LOC100305836 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein disulfide-isomerase LQY1, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein disulfide-isomerase LQY1, chloroplastic uncharacterized LOC11431794 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein enabled homolog protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like protein disulfide-isomerase LQY1, chloroplastic protein SPA, chloroplastic protein SPA, chloroplastic formin-like protein 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 3
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 3
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi01200 Carbon metabolism 6
bdi00710 Carbon fixation by Calvin cycle 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718924 823519 100305836 101260110 4326942 103636608 103848047 100244480 7478596 11431794 123062196 123079316 123070929 123444524 107953145 107954230 106347700 111211609 8072130 102602654 102619544 100843465
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