ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_13g563800v5	uncharacterized protein
cre-r.1	CHLRE_16g658650v5	uncharacterized protein
ath-u.5	MYA1	myosin 1
gma-u.5	100791070	myosin-9
gma-u.5	100791031	myosin-6
gma-u.5	100790815	myosin-17
sly-u.5	101267840	myosin-6-like
sly-u.5	101265848	myosin-15
sly-u.5	101264152	myosin-12
osa-u.5	4339453	myosin-17
osa-u.5	4325942	myosin-17
osa-u.5	4348352	protein OPAQUE1
zma-u.5	100216838	myosin-17
zma-u.5	103654209	protein OPAQUE1
zma-u.5	100383772	uncharacterized LOC100383772
bra-r.6	103862996	myosin-16
bra-r.6	103871614	myosin-9
vvi-u.5	100266890	myosin-17
ppo-u.5	7489286	myosin-12
mtr-u.5	25484310	myosin-11
mtr-u.5	25484177	myosin-6
mtr-u.5	11424655	myosin-12
tae-r.2	123070362	myosin-17
tae-r.2	123181269	myosin-8
tae-r.2	123128609	protein OPAQUE1
hvu-r.1	123444262	myosin-17-like
hvu-r.1	123452217	myosin-12-like
ghi-r.1	107907116	myosin-17
ghi-r.1	107916405	myosin-17
bna-r.1	125592405	myosin-11
bna-r.1	111205440	myosin-7
bna-r.1	111213583	myosin-17-like
sbi-r.1	8078219	myosin-17
sbi-r.1	8062777	protein OPAQUE1
sot-r.1	102581628	myosin-11-like
sot-r.1	102581429	myosin-6
sot-r.1	102584489	myosin-6
cit-r.1	102620713	myosin-15
cit-r.1	102624446	myosin-11
cit-r.1	102625595	myosin-6
bdi-r.1	100845088	protein OPAQUE1
bdi-r.1	100843681	myosin-6
nta-r.1	107773099	myosin-6-like

Top 50 coexpressed genes to CHLRE_13g563800v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_13g563800v5 (cre-r.1 coexpression data)

CoexMap"5718992"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0030050 [list] [network] vesicle transport along actin filament	(4 genes)	IEA
GO:0007015 [list] [network] actin filament organization	(30 genes)	IEA

GO CC

GO:0016459 [list] [network] myosin complex	(6 genes)	IEA
GO:0015629 [list] [network] actin cytoskeleton	(42 genes)	IEA
GO:0031982 [list] [network] vesicle	(135 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(2907 genes)	IEA

GO MF

GO:0000146 [list] [network] microfilament motor activity	(4 genes)	IEA
GO:0051015 [list] [network] actin filament binding	(18 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1223 genes)	IEA

Protein

XP_042917197.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R._plas 3, plas 2, E.R. 2, chlo 1, cyto 1, nucl 1, mito 1, pero 1

(predict for XP_042917197.1)

Subcellular
localization
TargetP

other 4

(predict for XP_042917197.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_13g563800v5	cre-r.1 for CHLRE_16g658650v5	ath-u.5 for MYA1	gma-u.5 for 100791070	gma-u.5 for 100791031	gma-u.5 for 100790815	sly-u.5 for 101267840	sly-u.5 for 101265848	sly-u.5 for 101264152	osa-u.5 for 4339453	osa-u.5 for 4325942	osa-u.5 for 4348352	zma-u.5 for 100216838	zma-u.5 for 103654209	zma-u.5 for 100383772	bra-r.6 for 103862996	bra-r.6 for 103871614	vvi-u.5 for 100266890	ppo-u.5 for 7489286	mtr-u.5 for 25484310	mtr-u.5 for 25484177	mtr-u.5 for 11424655	tae-r.2 for 123070362	tae-r.2 for 123181269	tae-r.2 for 123128609	hvu-r.1 for 123444262	hvu-r.1 for 123452217	ghi-r.1 for 107907116	ghi-r.1 for 107916405	bna-r.1 for 125592405	bna-r.1 for 111205440	bna-r.1 for 111213583	sbi-r.1 for 8078219	sbi-r.1 for 8062777	sot-r.1 for 102581628	sot-r.1 for 102581429	sot-r.1 for 102584489	cit-r.1 for 102620713	cit-r.1 for 102624446	cit-r.1 for 102625595	bdi-r.1 for 100845088	bdi-r.1 for 100843681	nta-r.1 for 107773099

Ortholog

Ortholog ID: 124

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

XI-I

Function^*

uncharacterized protein

myosin

myosin-20

myosin-1

myosin-18

myosin-12

myosin-17-like

myosin-9-like

myosin-17

myosin-12

myosin-17

uncharacterized LOC100383772

protein OPAQUE1-like

myosin-13

myosin-17

myosin-6

myosin-9

myosin-12

myosin-6

myosin-11

myosin-9

protein OPAQUE1

myosin-6

myosin-17-like

myosin-8-like

myosin-6

myosin-8

myosin-6

myosin-17-like

myosin-13-like

myosin-5

protein OPAQUE1

myosin-17

myosin-12

myosin-15

myosin-6-like

protein OPAQUE1

myosin-11

myosin-12

myosin-11-like

myosin-15

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	3
cre04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	4
gma04142	Lysosome	4
gma04144	Endocytosis	4
gma05100	Bacterial invasion of epithelial cells	4
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	6
gma04142	Lysosome	2
gma04144	Endocytosis	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	3
sly04144	Endocytosis	2
sly05100	Bacterial invasion of epithelial cells	2
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03083	Polycomb repressive complex	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	4
vvi04142	Lysosome	4
vvi04814	Motor proteins	2
vvi03013	Nucleocytoplasmic transport	2
vvi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	3
ppo04144	Endocytosis	3
ppo04814	Motor proteins	3
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	3
ppo04142	Lysosome	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	3
mtr04142	Lysosome	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2
mtr04142	Lysosome	2
mtr04144	Endocytosis	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04145	Phagosome	3
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04814	Motor proteins	2
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04814	Motor proteins	3
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	5
bna04518	Integrin signaling	5
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2
sot00562	Inositol phosphate metabolism	2
sot04070	Phosphatidylinositol signaling system	2
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	3
nta03420	Nucleotide excision repair	3
nta03083	Polycomb repressive complex	2
nta03250	Viral life cycle - HIV-1	2
nta02010	ABC transporters	2

Expression

Expression pattern

Entrez Gene ID^*

5718992

5723473

829456

100819463

100795648

100817933

101264152

101259860

101245463

4325942

4334102

100216838

100383772

103626243

103837999

103856447

100256590

100265237

7489286

7461476

7480903

25484310

25484329

123145738

123123983

123444262

123401235

107897865

107891970

107942153

111213583

106357519

106369027

8062777

8059179

102586997

102620713

102628638

100845088

100836631

100826389

107779589

107781407

The preparation time of this page was 1.2 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	2	1	3	3	3	3	2	1	1	3	3	2	2	3	2	3	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_13g563800v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_13g563800v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**