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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g572000v5   uncharacterized protein 
 ath-u.5   AT1G45110   Tetrapyrrole (Corrin/Porphyrin) Methylase 
 gma-u.5   100819709   ribosomal RNA small subunit methyltransferase I-like 
 sly-u.5   101264516   uncharacterized LOC101264516 
 osa-u.5   4348618   uncharacterized LOC4348618 
 zma-u.5   100384600   Tetrapyrrole (Corrin/Porphyrin) methylase 
 bra-r.6   103854365   ribosomal RNA small subunit methyltransferase I 
 vvi-u.5   100262613   uncharacterized LOC100262613 
 ppo-u.5   18099677   uncharacterized LOC18099677 
 mtr-u.5   25490229   ribosomal RNA small subunit methyltransferase I 
 tae-r.2   123180876   ribosomal RNA small subunit methyltransferase I 
 tae-r.2   123043525   ribosomal RNA small subunit methyltransferase I 
 hvu-r.1   123428892   ribosomal RNA small subunit methyltransferase I 
 ghi-r.1   107935092   ribosomal RNA small subunit methyltransferase I 
 ghi-r.1   107957689   ribosomal RNA small subunit methyltransferase I 
 bna-r.1   111211430   ribosomal RNA small subunit methyltransferase I 
 bna-r.1   111207239   ribosomal RNA small subunit methyltransferase I-like 
 sbi-r.1   8064922   ribosomal RNA small subunit methyltransferase I 
 sot-r.1   102604808   ribosomal RNA small subunit methyltransferase I 
 cit-r.1   102628899   uncharacterized LOC102628899 
 bdi-r.1   100822973   ribosomal RNA small subunit methyltransferase I 
 nta-r.1   107776490   uncharacterized LOC107776490 
 nta-r.1   107769765   uncharacterized LOC107769765 

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Top 50 coexpressed genes to CHLRE_13g572000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g572000v5 (cre-r.1 coexpression data)

CoexMap"5719156"


creCHLRE_13g572000v5 | Entrez gene ID : 5719156    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (194 genes)  IEA  
Protein XP_001693738.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_001693738.2)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for XP_001693738.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g572000v5
ath-u.5
for
AT1G45110
gma-u.5
for
100819709
sly-u.5
for
101264516
osa-u.5
for
4348618
zma-u.5
for
100384600
bra-r.6
for
103854365
vvi-u.5
for
100262613
ppo-u.5
for
18099677
mtr-u.5
for
25490229
tae-r.2
for
123180876
tae-r.2
for
123043525
hvu-r.1
for
123428892
ghi-r.1
for
107935092
ghi-r.1
for
107957689
bna-r.1
for
111211430
bna-r.1
for
111207239
sbi-r.1
for
8064922
sot-r.1
for
102604808
cit-r.1
for
102628899
bdi-r.1
for
100822973
nta-r.1
for
107776490
nta-r.1
for
107769765


Ortholog ID: 10504
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_13g572000v5 AT1G45110 LOC100819709 LOC101264516 LOC4348618 LOC100384600 LOC103854365 LOC100262613 LOC18099677 LOC25490229 LOC123180876 LOC123043525 LOC123428892 LOC107935092 LOC107957689 LOC111211430 LOC111207239 LOC8064922 LOC102604808 LOC102628899 LOC100822973 LOC107776490 LOC107769765
Function* uncharacterized protein Tetrapyrrole (Corrin/Porphyrin) Methylase ribosomal RNA small subunit methyltransferase I-like uncharacterized LOC101264516 uncharacterized LOC4348618 Tetrapyrrole (Corrin/Porphyrin) methylase ribosomal RNA small subunit methyltransferase I uncharacterized LOC100262613 uncharacterized LOC18099677 ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I-like ribosomal RNA small subunit methyltransferase I ribosomal RNA small subunit methyltransferase I uncharacterized LOC102628899 ribosomal RNA small subunit methyltransferase I uncharacterized LOC107776490 uncharacterized LOC107769765
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03018 RNA degradation 3
mtr00190 Oxidative phosphorylation 2
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719156 841078 100819709 101264516 4348618 100384600 103854365 100262613 18099677 25490229 123180876 123043525 123428892 107935092 107957689 111211430 111207239 8064922 102604808 102628899 100822973 107776490 107769765
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