ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_12g549750v5	uncharacterized protein
ath-u.5	ckl5	casein kinase I-like 5
ath-u.5	CKL2	casein kinase 1-like protein 2
ath-u.5	CKL13	casein kinase like 13
gma-u.5	100785851	casein kinase 1-like protein 1
gma-u.5	100784627	casein kinase 1-like protein 1
gma-u.5	100783824	casein kinase 1-like protein 6
sly-u.5	101254665	protein kinase superfamily protein
sly-u.5	101267121	casein kinase 1-like protein 10
sly-u.5	101265454	casein kinase 1-like protein 2
osa-u.5	4325891	casein kinase 1-like protein 3
osa-u.5	4331096	casein kinase 1-like protein 10
osa-u.5	4326345	uncharacterized LOC4326345
zma-u.5	100383522	putative casein kinase family protein
zma-u.5	100279946	putative casein kinase family protein
zma-u.5	100285265	casein kinase I
bra-r.6	103870642	casein kinase 1-like protein 11
bra-r.6	103834754	casein kinase 1-like protein 6
bra-r.6	103863880	casein kinase 1-like protein 1
vvi-u.5	100244694	casein kinase 1-like protein 2
vvi-u.5	100242639	casein kinase 1-like protein 10
vvi-u.5	100247344	casein kinase 1-like protein 3
ppo-u.5	7471533	casein kinase 1-like protein 3
ppo-u.5	7474626	uncharacterized LOC7474626
ppo-u.5	7475395	casein kinase 1-like protein 10
mtr-u.5	25490124	casein kinase I
mtr-u.5	11420813	casein kinase 1-like protein 10
mtr-u.5	25484237	casein kinase 1-like protein 6
tae-r.2	123127742	casein kinase 1
tae-r.2	123070386	casein kinase 1-like protein 2
tae-r.2	123060805	casein kinase 1-like protein 3
hvu-r.1	123443735	casein kinase I-like
hvu-r.1	123444240	casein kinase 1-like protein 2
hvu-r.1	123452604	casein kinase 1-like
ghi-r.1	107892798	casein kinase I
ghi-r.1	107929071	casein kinase 1-like protein 10
ghi-r.1	107930854	casein kinase 1-like protein 3
bna-r.1	125577886	casein kinase 1-like protein 8
bna-r.1	125575578	casein kinase 1-like protein 3
bna-r.1	125575072	casein kinase 1-like protein 7
sbi-r.1	110433550	casein kinase 1-like protein 3
sbi-r.1	110436292	casein kinase 1-like
sbi-r.1	8084684	casein kinase I
sot-r.1	102584304	casein kinase I-like
sot-r.1	102578304	casein kinase I-like
sot-r.1	102584967	casein kinase I
cit-r.1	102613955	casein kinase 1-like protein 3
cit-r.1	102618517	casein kinase 1-like protein 1
cit-r.1	102622007	casein kinase 1-like protein 2
bdi-r.1	100841036	casein kinase 1-like protein 10
bdi-r.1	100840824	casein kinase 1-like protein 2
nta-r.1	107786701	casein kinase 1-like protein 3
nta-r.1	107772563	casein kinase 1-like protein 10
nta-r.1	107807697	uncharacterized LOC107807697

Top 50 coexpressed genes to CHLRE_12g549750v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_12g549750v5 (cre-r.1 coexpression data)

CoexMap"5719647"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006897 [list] [network] endocytosis	(25 genes)	IEA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(62 genes)	IEA
GO:0007165 [list] [network] signal transduction	(396 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(1576 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(2907 genes)	IEA

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(211 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1223 genes)	IEA

Protein

XP_001693999.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, mito 2, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1

(predict for XP_001693999.1)

Subcellular
localization
TargetP

mito 6, other 5

(predict for XP_001693999.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_12g549750v5	ath-u.5 for ckl5	ath-u.5 for CKL2	ath-u.5 for CKL13	gma-u.5 for 100785851	gma-u.5 for 100784627	gma-u.5 for 100783824	sly-u.5 for 101254665	sly-u.5 for 101267121	sly-u.5 for 101265454	osa-u.5 for 4325891	osa-u.5 for 4331096	osa-u.5 for 4326345	zma-u.5 for 100383522	zma-u.5 for 100279946	zma-u.5 for 100285265	bra-r.6 for 103870642	bra-r.6 for 103834754	bra-r.6 for 103863880	vvi-u.5 for 100244694	vvi-u.5 for 100242639	vvi-u.5 for 100247344	ppo-u.5 for 7471533	ppo-u.5 for 7474626	ppo-u.5 for 7475395	mtr-u.5 for 25490124	mtr-u.5 for 11420813	mtr-u.5 for 25484237	tae-r.2 for 123127742	tae-r.2 for 123070386	tae-r.2 for 123060805	hvu-r.1 for 123443735	hvu-r.1 for 123444240	hvu-r.1 for 123452604	ghi-r.1 for 107892798	ghi-r.1 for 107929071	ghi-r.1 for 107930854	bna-r.1 for 125577886	bna-r.1 for 125575578	bna-r.1 for 125575072	sbi-r.1 for 110433550	sbi-r.1 for 110436292	sbi-r.1 for 8084684	sot-r.1 for 102584304	sot-r.1 for 102578304	sot-r.1 for 102584967	cit-r.1 for 102613955	cit-r.1 for 102618517	cit-r.1 for 102622007	bdi-r.1 for 100841036	bdi-r.1 for 100840824	nta-r.1 for 107786701	nta-r.1 for 107772563	nta-r.1 for 107807697

Ortholog

Ortholog ID: 103

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_12g549750v5

ckl8

CK1

CKL6

Function^*

uncharacterized protein

casein kinase I-like 8

casein kinase 1

casein kinase I-like 6

casein kinase 1-like protein 6

casein kinase 1-like protein 3

casein kinase 1-like protein 10

protein kinase superfamily protein

casein kinase 1-like protein 11

casein kinase 1-like protein 2

casein kinase 1-like protein 3

casein kinase 1-like

putative casein kinase family protein

casein kinase I

casein kinase 1-like protein 2

casein kinase 1-like protein 5

casein kinase 1-like protein 8

casein kinase 1-like protein 12

casein kinase 1-like protein 3

casein kinase 1-like protein 2

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase I

casein kinase 1-like protein 1

casein kinase I

casein kinase 1-like protein 3

casein kinase I-like

casein kinase 1-like protein 2

casein kinase I-like

casein kinase 1-like protein 10

casein kinase 1-like protein 7

casein kinase 1-like protein 10

casein kinase 1-like protein 12

casein kinase 1-like protein 6

casein kinase 1-like protein 3

casein kinase 1-like protein 2

casein kinase 1-like protein 3

casein kinase I

casein kinase 1-like protein 2

casein kinase 1-like protein 10

casein kinase 1-like protein 3

casein kinase 1

casein kinase 1-like protein 11

uncharacterized LOC107769362

casein kinase 1-like protein 3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03015	mRNA surveillance pathway	3
cre04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04517	IgSF CAM signaling	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	5
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2
zma00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	3
bra03420	Nucleotide excision repair	3
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae03060	Protein export	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5
hvu04626	Plant-pathogen interaction	3
hvu04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
ghi00190	Oxidative phosphorylation	2
ghi00860	Porphyrin metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2
ghi04144	Endocytosis	2
ghi04814	Motor proteins	2
ghi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	3
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	4
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00030	Pentose phosphate pathway	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

5719647

834350

828716

828972

100789031

100805890

100804897

101254665

101262628

101258260

4325891

4336396

4330018

100383522

100285265

100273747

103837959

103839247

103851790

100247344

100261234

100265228

7485740

7467543

18107696

11420813

11430421

25481844

123069955

123078410

123137039

123443735

123444240

123401749

107936256

107926818

107897892

106406932

106416395

106389778

110433550

8066565

8080405

102592835

102596684

102598967

102622007

102626357

102631472

100841036

100838167

100835656

107818766

107769362

107813141

The preparation time of this page was 0.6 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_12g549750v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_12g549750v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**