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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g552851v5   uncharacterized protein 
 ath-u.5   SPY   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100807843   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 gma-u.5   100785784   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 gma-u.5   100779014   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 sly-u.5   spy   SPY protein 
 osa-u.5   4346315   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 zma-u.5   100191509   uncharacterized LOC100191509 
 bra-r.6   103870335   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 bra-r.6   103859396   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 vvi-u.5   100259643   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 ppo-u.5   7492241   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 ppo-u.5   7465253   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 mtr-u.5   25483793   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 tae-r.2   123143698   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 tae-r.2   123136197   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 tae-r.2   123132163   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 hvu-r.1   123406158   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 ghi-r.1   107951711   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 ghi-r.1   107936788   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 ghi-r.1   107928200   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 bna-r.1   106452485   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 bna-r.1   106353052   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 bna-r.1   106349352   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 sbi-r.1   8057815   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 sot-r.1   102593198   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 cit-r.1   102611099   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 bdi-r.1   100828008   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 
 nta-r.1   107773816   putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 

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Top 50 coexpressed genes to CHLRE_12g552851v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g552851v5 (cre-r.1 coexpression data)

CoexMap"5719692"


creCHLRE_12g552851v5 | Entrez gene ID : 5719692      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 1 1 2 1 2 1 3 1 3 3 1 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00514 [list] [network] Other types of O-glycan biosynthesis (18 genes)
cre03083 [list] [network] Polycomb repressive complex (13 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042918964.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  E.R. 2,  cyto_nucl 2,  nucl_plas 2  (predict for XP_042918964.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_042918964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g552851v5
ath-u.5
for
SPY
gma-u.5
for
100807843
gma-u.5
for
100785784
gma-u.5
for
100779014
sly-u.5
for
spy
osa-u.5
for
4346315
zma-u.5
for
100191509
bra-r.6
for
103870335
bra-r.6
for
103859396
vvi-u.5
for
100259643
ppo-u.5
for
7492241
ppo-u.5
for
7465253
mtr-u.5
for
25483793
tae-r.2
for
123143698
tae-r.2
for
123136197
tae-r.2
for
123132163
hvu-r.1
for
123406158
ghi-r.1
for
107951711
ghi-r.1
for
107936788
ghi-r.1
for
107928200
bna-r.1
for
106452485
bna-r.1
for
106353052
bna-r.1
for
106349352
sbi-r.1
for
8057815
sot-r.1
for
102593198
cit-r.1
for
102611099
bdi-r.1
for
100828008
nta-r.1
for
107773816


Ortholog ID: 6868
Species cre ath gma gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta
Symbol CHLRE_12g552851v5 SPY LOC100785784 LOC100779014 SPY1 spy LOC4346315 LOC100191509 LOC103870335 LOC103859396 LOC100259643 LOC7492241 LOC7465253 LOC25483793 LOC123143698 LOC123136197 LOC123132163 LOC123406158 LOC107951711 LOC107936788 LOC107928200 LOC106452485 LOC106349352 LOC111215739 LOC8057815 LOC102593198 LOC102611099 LOC100828008 LOC107773816
Function* uncharacterized protein Tetratricopeptide repeat (TPR)-like superfamily protein probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY-like SPY protein probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY uncharacterized LOC100191509 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
gma03460 Fanconi anemia pathway 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae00514 Other types of O-glycan biosynthesis 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00514 Other types of O-glycan biosynthesis 3
tae03083 Polycomb repressive complex 3
tae03018 RNA degradation 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae00514 Other types of O-glycan biosynthesis 3
tae03083 Polycomb repressive complex 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00514 Other types of O-glycan biosynthesis 4
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00514 Other types of O-glycan biosynthesis 4
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00514 Other types of O-glycan biosynthesis 4
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00514 Other types of O-glycan biosynthesis 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00514 Other types of O-glycan biosynthesis 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00514 Other types of O-glycan biosynthesis 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719692 820327 100785784 100779014 100776844 543775 4346315 100191509 103870335 103859396 100259643 7492241 7465253 25483793 123143698 123136197 123132163 123406158 107951711 107936788 107928200 106452485 106349352 111215739 8057815 102593198 102611099 100828008 107773816
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