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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g383000v5   uncharacterized protein 
 cre-r.1   CHLRE_01g009650v5   uncharacterized protein 
 cre-r.1   CHLRE_08g385350v5   uncharacterized protein 
 cre-r.1   CHLRE_01g009575v5   uncharacterized protein 
 ath-u.5   SMZ   Integrase-type DNA-binding superfamily protein 
 ath-u.5   TOE3   target of early activation tagged (EAT) 3 
 ath-u.5   TOE2   target of early activation tagged (EAT) 2 
 gma-u.5   100797238   APETALA2-like protein 3 
 gma-u.5   100788303   ethylene-responsive transcription factor RAP2-7 
 gma-u.5   100786333   floral homeotic protein APETALA 2 
 sly-u.5   101252772   ethylene-responsive transcription factor RAP2-7-like 
 sly-u.5   101259280   ethylene-responsive transcription factor RAP2-7-like 
 sly-u.5   AP2a   APETALA2a 
 osa-u.5   4337654   AP2-like ethylene-responsive transcription factor TOE3 
 osa-u.5   4334582   APETALA2-like protein 2 
 zma-u.5   100381947   uncharacterized LOC100381947 
 zma-u.5   100271892   sister of indeterminate spikelet 1 
 zma-u.5   100280414   uncharacterized LOC100280414 
 bra-r.6   103851522   AP2-like ethylene-responsive transcription factor TOE2 
 bra-r.6   103845425   AP2-like ethylene-responsive transcription factor TOE2 
 bra-r.6   103829752   ethylene-responsive transcription factor RAP2-7 
 vvi-u.5   100246815   ethylene-responsive transcription factor RAP2-7 
 vvi-u.5   AP2   transcription factor APETALA2 
 vvi-u.5   100263240   AP2-like ethylene-responsive transcription factor TOE3 
 ppo-u.5   7469774   APETALA2-like protein 3 
 ppo-u.5   7489744   AP2-like ethylene-responsive transcription factor TOE3 
 ppo-u.5   18100239   APETALA2-like protein 3 
 mtr-u.5   25493474   floral homeotic protein APETALA 2 
 mtr-u.5   11406478   ethylene-responsive transcription factor RAP2-7 
 mtr-u.5   11407832   floral homeotic protein APETALA 2 
 tae-r.2   543013   APETALA2-like protein 1 
 tae-r.2   123190780   APETALA2-like protein 5 
 tae-r.2   123188660   APETALA2-like protein 1 
 hvu-r.1   123428148   APETALA2-like protein 5 
 hvu-r.1   123453013   APETALA2-like protein 2 
 hvu-r.1   123403691   APETALA2-like protein 1 
 ghi-r.1   107931690   floral homeotic protein APETALA 2 
 ghi-r.1   107913226   floral homeotic protein APETALA 2 
 ghi-r.1   107909317   floral homeotic protein APETALA 2 
 bna-r.1   106437467   ethylene-responsive transcription factor RAP2-7 
 bna-r.1   106438341   ethylene-responsive transcription factor RAP2-7-like 
 bna-r.1   106439870   AP2-like ethylene-responsive transcription factor SMZ 
 sbi-r.1   8068364   ethylene-responsive transcription factor RAP2-7 
 sbi-r.1   8057377   floral homeotic protein APETALA 2 
 sbi-r.1   8068151   ethylene-responsive transcription factor RAP2-7 
 sot-r.1   102606071   ethylene-responsive transcription factor RAP2-7-like 
 sot-r.1   102589826   AP2-like ethylene-responsive transcription factor TOE3 
 sot-r.1   102582568   floral homeotic protein APETALA 2 
 cit-r.1   102621126   floral homeotic protein APETALA 2-like 
 cit-r.1   102621401   APETALA2-like protein 2 
 cit-r.1   102622542   floral homeotic protein APETALA 2 
 bdi-r.1   100821738   floral homeotic protein APETALA 2 
 bdi-r.1   100839861   floral homeotic protein APETALA 2 
 bdi-r.1   100828894   floral homeotic protein APETALA 2 
 nta-r.1   107819773   ethylene-responsive transcription factor RAP2-7 
 nta-r.1   107764494   floral homeotic protein APETALA 2 
 nta-r.1   107778909   AP2-like ethylene-responsive transcription factor TOE3 

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Top 50 coexpressed genes to CHLRE_08g383000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g383000v5 (cre-r.1 coexpression data)

CoexMap"5719829"


creCHLRE_08g383000v5 | Entrez gene ID : 5719829    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 4 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (405 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (142 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042922312.1 [sequence] [blastp]
XP_042922313.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_042922312.1)
chlo 6,  nucl 4  (predict for XP_042922313.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_042922312.1)
mito 5  (predict for XP_042922313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g383000v5
cre-r.1
for
CHLRE_01g009650v5
cre-r.1
for
CHLRE_08g385350v5
cre-r.1
for
CHLRE_01g009575v5
ath-u.5
for
SMZ
ath-u.5
for
TOE3
ath-u.5
for
TOE2
gma-u.5
for
100797238
gma-u.5
for
100788303
gma-u.5
for
100786333
sly-u.5
for
101252772
sly-u.5
for
101259280
sly-u.5
for
AP2a
osa-u.5
for
4337654
osa-u.5
for
4334582
zma-u.5
for
100381947
zma-u.5
for
100271892
zma-u.5
for
100280414
bra-r.6
for
103851522
bra-r.6
for
103845425
bra-r.6
for
103829752
vvi-u.5
for
100246815
vvi-u.5
for
AP2
vvi-u.5
for
100263240
ppo-u.5
for
7469774
ppo-u.5
for
7489744
ppo-u.5
for
18100239
mtr-u.5
for
25493474
mtr-u.5
for
11406478
mtr-u.5
for
11407832
tae-r.2
for
543013
tae-r.2
for
123190780
tae-r.2
for
123188660
hvu-r.1
for
123428148
hvu-r.1
for
123453013
hvu-r.1
for
123403691
ghi-r.1
for
107931690
ghi-r.1
for
107913226
ghi-r.1
for
107909317
bna-r.1
for
106437467
bna-r.1
for
106438341
bna-r.1
for
106439870
sbi-r.1
for
8068364
sbi-r.1
for
8057377
sbi-r.1
for
8068151
sot-r.1
for
102606071
sot-r.1
for
102589826
sot-r.1
for
102582568
cit-r.1
for
102621126
cit-r.1
for
102621401
cit-r.1
for
102622542
bdi-r.1
for
100821738
bdi-r.1
for
100839861
bdi-r.1
for
100828894
nta-r.1
for
107819773
nta-r.1
for
107764494
nta-r.1
for
107778909


Ortholog ID: 395
Species cre cre cre ath ath ath gma gma gma sly sly sly osa osa zma zma zma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_08g383000v5 CHLRE_01g009650v5 CHLRE_01g009575v5 SMZ TOE2 SNZ LOC100797238 LOC100788303 LOC100808212 LOC101259280 AP2c AP2e LOC4342787 LOC9269072 LOC100271892 LOC100280414 LOC732805 LOC103851522 LOC103845425 LOC103829531 LOC100246815 AP2 LOC18100239 LOC7465291 LOC7489618 LOC11406478 LOC11407832 LOC11417561 LOC543013 LOC123123462 LOC123428148 LOC123453013 LOC123409793 LOC107931690 LOC107913226 LOC107959062 LOC125594129 LOC106423299 LOC106366778 LOC8068364 LOC8057377 LOC8068151 LOC102582568 LOC102605336 LOC102579807 LOC102622542 LOC102627474 LOC102606994 LOC100839861 LOC100831490 LOC100825522 LOC107764494 LOC107803429 LOC107810888
Function* uncharacterized protein uncharacterized protein uncharacterized protein Integrase-type DNA-binding superfamily protein target of early activation tagged (EAT) 2 Integrase-type DNA-binding superfamily protein APETALA2-like protein 3 ethylene-responsive transcription factor RAP2-7 APETALA2-like protein 3 ethylene-responsive transcription factor RAP2-7-like APETALA2-like protein AP2c APETALA2-like protein AP2e APETALA2-like protein 3 AP2-like ethylene-responsive transcription factor TOE3 sister of indeterminate spikelet 1 uncharacterized LOC100280414 glossy15 AP2-like ethylene-responsive transcription factor TOE2 AP2-like ethylene-responsive transcription factor TOE2 AP2-like ethylene-responsive transcription factor TOE3 ethylene-responsive transcription factor RAP2-7 transcription factor APETALA2 APETALA2-like protein 3 APETALA2-like protein 3 APETALA2-like protein 3 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 APETALA2-like protein 1 APETALA2-like protein 2 APETALA2-like protein 5 APETALA2-like protein 2 APETALA2-like protein 4 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2-like floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7-like ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 AP2/ERF and B3 domain-containing transcription factor ARF14-like floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
sly00908 Zeatin biosynthesis 3
sly00996 Biosynthesis of various alkaloids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 4
zma00500 Starch and sucrose metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 9
ghi01320 Sulfur cycle 7
ghi00230 Purine metabolism 4
ghi00261 Monobactam biosynthesis 4
ghi00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 2
sot03010 Ribosome 2
sot00785 Lipoic acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00640 Propanoate metabolism 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 5
cit04146 Peroxisome 3
cit00071 Fatty acid degradation 2
cit01040 Biosynthesis of unsaturated fatty acids 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
cit00620 Pyruvate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719829 5725812 5725844 824664 836134 818510 100797238 100788303 100808212 101259280 100736534 100736535 4342787 9269072 100271892 100280414 732805 103851522 103845425 103829531 100246815 100268051 18100239 7465291 7489618 11406478 11407832 11417561 543013 123123462 123428148 123453013 123409793 107931690 107913226 107959062 125594129 106423299 106366778 8068364 8057377 8068151 102582568 102605336 102579807 102622542 102627474 102606994 100839861 100831490 100825522 107764494 107803429 107810888
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