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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g382500v5   ribosomal protein S25 
 ath-u.5   AT4G39200   Ribosomal protein S25 family protein 
 ath-u.5   AT2G21580   Ribosomal protein S25 family protein 
 gma-u.5   100499810   uncharacterized LOC100499810 
 gma-u.5   100786842   40S ribosomal protein S25-2 
 gma-u.5   100789867   40S ribosomal protein S25 
 sly-u.5   101261290   ribosomal protein S25 
 sly-u.5   RPS25   ribosomal protein S25 
 osa-u.5   4347899   40S ribosomal protein S25-2 
 osa-u.5   4349810   small ribosomal subunit protein eS25 
 osa-u.5   4346314   small ribosomal subunit protein eS25y 
 zma-u.5   100281626   40S ribosomal protein S25-1 
 zma-u.5   100280801   40S ribosomal protein S25-1 
 zma-u.5   100193720   40S ribosomal protein S25-1 
 bra-r.6   103860450   40S ribosomal protein S25-3 
 bra-r.6   103864282   40S ribosomal protein S25-4 
 bra-r.6   103842511   40S ribosomal protein S25-4 
 vvi-u.5   100249356   small ribosomal subunit protein eS25 
 vvi-u.5   100265344   small ribosomal subunit protein eS25 
 vvi-u.5   100258834   40S ribosomal protein S25-4-like 
 ppo-u.5   7490893   40S ribosomal protein S25 
 ppo-u.5   7491621   40S ribosomal protein S25 
 ppo-u.5   7464019   40S ribosomal protein S25 
 mtr-u.5   11406592   40S ribosomal protein S25-2 
 mtr-u.5   11416848   40S ribosomal protein S25-2 
 tae-r.2   123172651   40S ribosomal protein S25-2 
 hvu-r.1   123446838   40S ribosomal protein S25-2 
 ghi-r.1   107928897   40S ribosomal protein S25-4 
 ghi-r.1   107908793   40S ribosomal protein S25-4 
 ghi-r.1   107918575   40S ribosomal protein S25-4 
 bna-r.1   106406029   40S ribosomal protein S25-3 
 bna-r.1   106446370   40S ribosomal protein S25-4-like 
 bna-r.1   106410768   40S ribosomal protein S25-4 
 sbi-r.1   8057717   40S ribosomal protein S25-4 
 sbi-r.1   8082383   40S ribosomal protein S25-4 
 sbi-r.1   8082384   40S ribosomal protein S25-2 
 sot-r.1   102584409   40S ribosomal protein S25 
 sot-r.1   102600827   40S ribosomal protein S25-2 
 cit-r.1   102620206   40S ribosomal protein S25-3 
 cit-r.1   102629500   40S ribosomal protein S25-2 
 bdi-r.1   100829243   40S ribosomal protein S25-2 
 bdi-r.1   100827698   40S ribosomal protein S25-2 
 bdi-r.1   100833253   40S ribosomal protein S25-2 
 nta-r.1   107807859   small ribosomal subunit protein eS25 
 nta-r.1   107787568   small ribosomal subunit protein eS25 
 nta-r.1   107768022   small ribosomal subunit protein eS25 

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Top 50 coexpressed genes to CHLRE_08g382500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g382500v5 (cre-r.1 coexpression data)

CoexMap"5719839"


creCHLRE_08g382500v5 | Entrez gene ID : 5719839      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 2 3 3 3 3 3 2 1 1 3 3 3 2 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (30 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001694225.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1  (predict for XP_001694225.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001694225.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g382500v5
ath-u.5
for
AT4G39200
ath-u.5
for
AT2G21580
gma-u.5
for
100499810
gma-u.5
for
100786842
gma-u.5
for
100789867
sly-u.5
for
101261290
sly-u.5
for
RPS25
osa-u.5
for
4347899
osa-u.5
for
4349810
osa-u.5
for
4346314
zma-u.5
for
100281626
zma-u.5
for
100280801
zma-u.5
for
100193720
bra-r.6
for
103860450
bra-r.6
for
103864282
bra-r.6
for
103842511
vvi-u.5
for
100249356
vvi-u.5
for
100265344
vvi-u.5
for
100258834
ppo-u.5
for
7490893
ppo-u.5
for
7491621
ppo-u.5
for
7464019
mtr-u.5
for
11406592
mtr-u.5
for
11416848
tae-r.2
for
123172651
hvu-r.1
for
123446838
ghi-r.1
for
107928897
ghi-r.1
for
107908793
ghi-r.1
for
107918575
bna-r.1
for
106406029
bna-r.1
for
106446370
bna-r.1
for
106410768
sbi-r.1
for
8057717
sbi-r.1
for
8082383
sbi-r.1
for
8082384
sot-r.1
for
102584409
sot-r.1
for
102600827
cit-r.1
for
102620206
cit-r.1
for
102629500
bdi-r.1
for
100829243
bdi-r.1
for
100827698
bdi-r.1
for
100833253
nta-r.1
for
107807859
nta-r.1
for
107787568
nta-r.1
for
107768022


Ortholog ID: 1333
Species cre ath ath gma gma gma sly sly osa osa osa zma zma zma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_08g382500v5 AT4G39200 AT2G21580 LOC100499810 LOC100786842 LOC100789867 LOC101261290 RPS25 LOC4347899 LOC4349810 LOC4346314 LOC100281626 LOC100193720 LOC100283674 LOC103842511 LOC103834204 LOC103828059 LOC100249356 LOC100265344 LOC100258834 LOC7490893 LOC7491621 LOC7464019 LOC11406592 LOC11416848 LOC123446838 LOC123446840 LOC107927820 LOC107942425 LOC107949103 LOC106410768 LOC106438930 LOC106365970 LOC8057717 LOC8082383 LOC8082384 LOC102584409 LOC102600827 LOC102620206 LOC102629500 LOC100829243 LOC100827698 LOC100833253 LOC107807859 LOC107787568 LOC107815372
Function* ribosomal protein S25 Ribosomal protein S25 family protein Ribosomal protein S25 family protein uncharacterized LOC100499810 40S ribosomal protein S25-2 40S ribosomal protein S25 ribosomal protein S25 ribosomal protein S25 40S ribosomal protein S25-2 small ribosomal subunit protein eS25 small ribosomal subunit protein eS25y 40S ribosomal protein S25-1 40S ribosomal protein S25-1 40S ribosomal protein S25-like 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 small ribosomal subunit protein eS25 small ribosomal subunit protein eS25 40S ribosomal protein S25-4-like 40S ribosomal protein S25 40S ribosomal protein S25 40S ribosomal protein S25 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-4 40S ribosomal protein S25-2 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-2 40S ribosomal protein S25 40S ribosomal protein S25-2 40S ribosomal protein S25-3 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-2 small ribosomal subunit protein eS25 small ribosomal subunit protein eS25 small ribosomal subunit protein eS25
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719839 830075 816696 100499810 100786842 100789867 101261290 544096 4347899 4349810 4346314 100281626 100193720 100283674 103842511 103834204 103828059 100249356 100265344 100258834 7490893 7491621 7464019 11406592 11416848 123446838 123446840 107927820 107942425 107949103 106410768 106438930 106365970 8057717 8082383 8082384 102584409 102600827 102620206 102629500 100829243 100827698 100833253 107807859 107787568 107815372
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