ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_08g381950v5	uncharacterized protein
ath-u.5	YAK1	YAK1-like protein 1
gma-u.5	100792777	dual specificity protein kinase YAK1 homolog
gma-u.5	100786931	dual specificity protein kinase YAK1 homolog
sly-u.5	101245740	dual specificity protein kinase YAK1 homolog
osa-u.5	4330444	dual specificity protein kinase YAK1 homolog
osa-u.5	4336893	dual specificity protein kinase YAK1 homolog
zma-u.5	100382570	uncharacterized LOC100382570
zma-u.5	100304314	uncharacterized LOC100304314
bra-r.6	103849185	dual specificity protein kinase YAK1 homolog
bra-r.6	103868298	dual specificity protein kinase YAK1 homolog
vvi-u.5	100240775	dual specificity protein kinase YAK1 homolog
ppo-u.5	7465616	dual specificity protein kinase YAK1 homolog
ppo-u.5	7491086	dual specificity protein kinase YAK1 homolog
mtr-u.5	25501540	dual specificity protein kinase YAK1 homolog
tae-r.2	123054396	dual specificity protein kinase YAK1 homolog
tae-r.2	123128111	dual specificity protein kinase YAK1 homolog
tae-r.2	123137899	dual specificity protein kinase YAK1 homolog
hvu-r.1	123406225	dual specificity protein kinase YAK1 homolog
hvu-r.1	123427709	dual specificity protein kinase YAK1 homolog
ghi-r.1	121212524	dual specificity protein kinase YAK1 homolog
ghi-r.1	107937822	dual specificity protein kinase YAK1 homolog
ghi-r.1	107891373	dual specificity protein kinase YAK1 homolog
bna-r.1	106384872	dual specificity protein kinase YAK1 homolog
bna-r.1	106390832	dual specificity protein kinase YAK1 homolog
bna-r.1	106381243	dual specificity protein kinase YAK1 homolog
sbi-r.1	8073868	serine/threonine-protein kinase minibrain
sot-r.1	102593889	dual specificity tyrosine-phosphorylation-regulated kinase 1A
cit-r.1	102631078	dual specificity protein kinase YAK1 homolog
bdi-r.1	100844178	dual specificity protein kinase YAK1 homolog
bdi-r.1	100824458	dual specificity protein kinase YAK1 homolog
nta-r.1	107795930	dual specificity protein kinase YAK1 homolog
nta-r.1	107804693	dual specificity protein kinase YAK1 homolog

Top 50 coexpressed genes to CHLRE_08g381950v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_08g381950v5 (cre-r.1 coexpression data)

CoexMap"5719848"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0018107 [list] [network] peptidyl-threonine phosphorylation	(20 genes)	IEA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(62 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(2907 genes)

IEA

GO MF

GO:0004713 [list] [network] protein tyrosine kinase activity	(43 genes)	IEA
GO:0004674 [list] [network] protein serine/threonine kinase activity	(211 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1223 genes)	IEA

Protein

XP_042922284.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_042922284.1)

Subcellular
localization
TargetP

other 4

(predict for XP_042922284.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_08g381950v5	ath-u.5 for YAK1	gma-u.5 for 100792777	gma-u.5 for 100786931	sly-u.5 for 101245740	osa-u.5 for 4330444	osa-u.5 for 4336893	zma-u.5 for 100382570	zma-u.5 for 100304314	bra-r.6 for 103849185	bra-r.6 for 103868298	vvi-u.5 for 100240775	ppo-u.5 for 7465616	ppo-u.5 for 7491086	mtr-u.5 for 25501540	tae-r.2 for 123054396	tae-r.2 for 123128111	tae-r.2 for 123137899	hvu-r.1 for 123406225	hvu-r.1 for 123427709	ghi-r.1 for 121212524	ghi-r.1 for 107937822	ghi-r.1 for 107891373	bna-r.1 for 106384872	bna-r.1 for 106390832	bna-r.1 for 106381243	sbi-r.1 for 8073868	sot-r.1 for 102593889	cit-r.1 for 102631078	bdi-r.1 for 100844178	bdi-r.1 for 100824458	nta-r.1 for 107795930	nta-r.1 for 107804693

Ortholog

Ortholog ID: 5179

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

YAK1

Function^*

uncharacterized protein

YAK1-like protein 1

dual specificity protein kinase YAK1 homolog

uncharacterized LOC100382570

uncharacterized LOC100304314

dual specificity protein kinase YAK1 homolog

serine/threonine-protein kinase minibrain

dual specificity tyrosine-phosphorylation-regulated kinase 1A

dual specificity protein kinase YAK1 homolog

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3
bra03420	Nucleotide excision repair	2
bra04120	Ubiquitin mediated proteolysis	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04142	Lysosome	2
ppo04144	Endocytosis	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2
ppo04382	Cornified envelope formation	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae00562	Inositol phosphate metabolism	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04146	Peroxisome	2
hvu03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	3
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03460	Fanconi anemia pathway	2
nta04075	Plant hormone signal transduction	2
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03460	Fanconi anemia pathway	2
nta04075	Plant hormone signal transduction	2
nta04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

5719848

833590

100792777

100786931

101245740

4330444

4336893

100382570

100304314

103849185

103868298

100240775

7465616

7491086

25501540

123054396

123128111

123190279

123406225

123427709

121212524

107937822

107913565

106390832

106381243

106415235

8073868

102593889

102631078

100844178

100824458

107795930

107804693

The preparation time of this page was 0.2 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	2	2	2	1	2	1	3	2	3	3	1	1	1	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_08g381950v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g381950v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**