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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g376150v5   uncharacterized protein 
 ath-u.5   AT3G59630   diphthamide synthesis DPH2 family protein 
 gma-u.5   100808845   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 sly-u.5   101264686   uncharacterized LOC101264686 
 osa-u.5   4350247   uncharacterized LOC4350247 
 zma-u.5   100279605   uncharacterized LOC100279605 
 bra-r.6   103841808   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 vvi-u.5   100262956   uncharacterized LOC100262956 
 ppo-u.5   18100150   uncharacterized LOC18100150 
 mtr-u.5   11429602   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 tae-r.2   123091172   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 tae-r.2   123096172   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 tae-r.2   123086805   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 hvu-r.1   123447802   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 ghi-r.1   107899059   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 ghi-r.1   107890838   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 bna-r.1   106368444   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 bna-r.1   111209164   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 sbi-r.1   8079641   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 sot-r.1   102595478   diphthamide biosynthesis protein 2 
 cit-r.1   102620278   uncharacterized LOC102620278 
 bdi-r.1   100837924   2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 
 nta-r.1   107829003   uncharacterized LOC107829003 
 nta-r.1   107781343   uncharacterized LOC107781343 

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Top 50 coexpressed genes to CHLRE_08g376150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g376150v5 (cre-r.1 coexpression data)

CoexMap"5719941"


creCHLRE_08g376150v5 | Entrez gene ID : 5719941    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0017183 [list] [network] protein histidyl modification to diphthamide  (5 genes)  IEA  
GO CC
GO MF
GO:0090560 [list] [network] 2-(3-amino-3-carboxypropyl)histidine synthase activity  (2 genes)  IEA  
Protein XP_042922173.1 [sequence] [blastp]
XP_042922174.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  E.R. 2,  cyto_nucl 2,  E.R._plas 1  (predict for XP_042922173.1)
nucl 3,  E.R. 2,  E.R._plas 2,  cyto 1,  mito 1,  cysk_nucl 1  (predict for XP_042922174.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042922173.1)
other 9  (predict for XP_042922174.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g376150v5
ath-u.5
for
AT3G59630
gma-u.5
for
100808845
sly-u.5
for
101264686
osa-u.5
for
4350247
zma-u.5
for
100279605
bra-r.6
for
103841808
vvi-u.5
for
100262956
ppo-u.5
for
18100150
mtr-u.5
for
11429602
tae-r.2
for
123091172
tae-r.2
for
123096172
tae-r.2
for
123086805
hvu-r.1
for
123447802
ghi-r.1
for
107899059
ghi-r.1
for
107890838
bna-r.1
for
106368444
bna-r.1
for
111209164
sbi-r.1
for
8079641
sot-r.1
for
102595478
cit-r.1
for
102620278
bdi-r.1
for
100837924
nta-r.1
for
107829003
nta-r.1
for
107781343


Ortholog ID: 10833
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_08g376150v5 AT3G59630 LOC100808845 LOC101264686 LOC4350247 LOC100279605 LOC103841808 LOC100262956 LOC18100150 LOC11429602 LOC123091172 LOC123096172 LOC123086805 LOC123447802 LOC107899059 LOC107890838 LOC106368444 LOC111209164 LOC8079641 LOC102595478 LOC102620278 LOC100837924 LOC107829003 LOC107781343
Function* uncharacterized protein diphthamide synthesis DPH2 family protein 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 uncharacterized LOC101264686 uncharacterized LOC4350247 uncharacterized LOC100279605 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 uncharacterized LOC100262956 uncharacterized LOC18100150 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 diphthamide biosynthesis protein 2 uncharacterized LOC102620278 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 uncharacterized LOC107829003 uncharacterized LOC107781343
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03020 RNA polymerase 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta00020 Citrate cycle (TCA cycle) 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta00020 Citrate cycle (TCA cycle) 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719941 825132 100808845 101264686 4350247 100279605 103841808 100262956 18100150 11429602 123091172 123096172 123086805 123447802 107899059 107890838 106368444 111209164 8079641 102595478 102620278 100837924 107829003 107781343
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