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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g375900v5   uncharacterized protein 
 ath-u.5   AT1G73180   Eukaryotic translation initiation factor eIF2A family protein 
 gma-u.5   100811589   eukaryotic translation initiation factor 2A 
 gma-u.5   100810278   eukaryotic translation initiation factor 2A 
 sly-u.5   101250716   uncharacterized LOC101250716 
 osa-u.5   4329922   uncharacterized LOC4329922 
 zma-u.5   100304267   Eukaryotic translation initiation factor eIF2A family protein 
 bra-r.6   103830764   eukaryotic translation initiation factor 2A 
 vvi-u.5   100249064   eukaryotic translation initiation factor 2A 
 ppo-u.5   18104583   uncharacterized LOC18104583 
 mtr-u.5   11446232   eukaryotic translation initiation factor 2A 
 tae-r.2   123144759   eukaryotic translation initiation factor 2A 
 tae-r.2   123137412   eukaryotic translation initiation factor 2A 
 tae-r.2   123127646   eukaryotic translation initiation factor 2A 
 hvu-r.1   123401582   eukaryotic translation initiation factor 2A 
 ghi-r.1   107927403   eukaryotic translation initiation factor 2A 
 ghi-r.1   107902972   eukaryotic translation initiation factor 2A 
 bna-r.1   111197819   eukaryotic translation initiation factor 2A-like 
 bna-r.1   106406433   eukaryotic translation initiation factor 2A-like 
 sbi-r.1   8056502   eukaryotic translation initiation factor 2A 
 sot-r.1   102604215   eukaryotic translation initiation factor 2A 
 cit-r.1   102615606   uncharacterized LOC102615606 
 bdi-r.1   100841968   eukaryotic translation initiation factor 2A 
 nta-r.1   107830249   uncharacterized LOC107830249 
 nta-r.1   107819466   uncharacterized LOC107819466 
 nta-r.1   107782916   uncharacterized LOC107782916 

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Top 50 coexpressed genes to CHLRE_08g375900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g375900v5 (cre-r.1 coexpression data)

CoexMap"5719945"


creCHLRE_08g375900v5 | Entrez gene ID : 5719945      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 3
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (30 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (30 genes)  IEA  
GO MF
GO:0000049 [list] [network] tRNA binding  (34 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (37 genes)  IEA  
GO:0043022 [list] [network] ribosome binding  (39 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (109 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042922170.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 2  (predict for XP_042922170.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042922170.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g375900v5
ath-u.5
for
AT1G73180
gma-u.5
for
100811589
gma-u.5
for
100810278
sly-u.5
for
101250716
osa-u.5
for
4329922
zma-u.5
for
100304267
bra-r.6
for
103830764
vvi-u.5
for
100249064
ppo-u.5
for
18104583
mtr-u.5
for
11446232
tae-r.2
for
123144759
tae-r.2
for
123137412
tae-r.2
for
123127646
hvu-r.1
for
123401582
ghi-r.1
for
107927403
ghi-r.1
for
107902972
bna-r.1
for
111197819
bna-r.1
for
106406433
sbi-r.1
for
8056502
sot-r.1
for
102604215
cit-r.1
for
102615606
bdi-r.1
for
100841968
nta-r.1
for
107830249
nta-r.1
for
107819466
nta-r.1
for
107782916


Ortholog ID: 9295
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_08g375900v5 AT1G73180 LOC100811589 LOC100810278 LOC101250716 LOC4329922 LOC100304267 LOC103830764 LOC100249064 LOC18104583 LOC11446232 LOC123144759 LOC123137412 LOC123127646 LOC123401582 LOC107927403 LOC107902972 LOC111197819 LOC106406433 LOC8056502 LOC102604215 LOC102615606 LOC100841968 LOC107819466 LOC107782916 LOC107813125
Function* uncharacterized protein Eukaryotic translation initiation factor eIF2A family protein eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A uncharacterized LOC101250716 uncharacterized LOC4329922 Eukaryotic translation initiation factor eIF2A family protein eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A uncharacterized LOC18104583 eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A-like eukaryotic translation initiation factor 2A-like eukaryotic translation initiation factor 2A eukaryotic translation initiation factor 2A uncharacterized LOC102615606 eukaryotic translation initiation factor 2A uncharacterized LOC107819466 uncharacterized LOC107782916 uncharacterized LOC107813125
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 3
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
gma04141 Protein processing in endoplasmic reticulum 3
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr01230 Biosynthesis of amino acids 3
mtr00480 Glutathione metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 9
tae00450 Selenocompound metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 9
tae00450 Selenocompound metabolism 6
tae00190 Oxidative phosphorylation 2
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03083 Polycomb repressive complex 4
ghi00500 Starch and sucrose metabolism 2
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03083 Polycomb repressive complex 4
ghi00500 Starch and sucrose metabolism 2
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04146 Peroxisome 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719945 843652 100811589 100810278 101250716 4329922 100304267 103830764 100249064 18104583 11446232 123144759 123137412 123127646 123401582 107927403 107902972 111197819 106406433 8056502 102604215 102615606 100841968 107819466 107782916 107813125
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