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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1  CHLRE_08g373583v5  uncharacterized protein 
 cre-r.1  CHLRE_03g198150v5  uncharacterized protein 
 ath-u.5  AT3G44370  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein 
 ath-u.5  AT1G65080  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein 
 gma-u.5  100797573  ALBINO3-like protein 2, chloroplastic 
 sly-u.5  101253961  ALBINO3-like protein 3, mitochondrial 
 sly-u.5  101246494  ALBINO3-like protein 3, mitochondrial 
 osa-u.5  4340267  ALBINO3-like protein 2, chloroplastic 
 zma-u.5  103638011  ALBINO3-like protein 2, chloroplastic 
 bra-r.6  103852215  ALBINO3-like protein 2, chloroplastic 
 bra-r.6  103873644  ALBINO3-like protein 3, mitochondrial 
 vvi-u.5  100247921  ALBINO3-like protein 2, chloroplastic 
 ppo-u.5  7456346  ALBINO3-like protein 2, chloroplastic 
 ppo-u.5  7478985  ALBINO3-like protein 2, chloroplastic 
 mtr-u.5  11416907  ALBINO3-like protein 2, chloroplastic 
 tae-r.2  123167000  ALBINO3-like protein 2, chloroplastic 
 tae-r.2  123157294  ALBINO3-like protein 2, chloroplastic 
 tae-r.2  123152548  ALBINO3-like protein 2, chloroplastic 
 hvu-r.1  123410831  ALBINO3-like protein 2, chloroplastic 
 ghi-r.1  107888790  ALBINO3-like protein 2, chloroplastic 
 ghi-r.1  107890438  ALBINO3-like protein 3, mitochondrial 
 bna-r.1  106452143  ALBINO3-like protein 3, mitochondrial 
 bna-r.1  106405996  ALBINO3-like protein 2, chloroplastic 
 bna-r.1  106347678  ALBINO3-like protein 3, mitochondrial 
 sbi-r.1  8076160  ALBINO3-like protein 2, chloroplastic 
 sot-r.1  107058921  ALBINO3-like protein 3, mitochondrial 
 sot-r.1  102599172  ALBINO3-like protein 3, mitochondrial 
 sot-r.1  102588589  ALBINO3-like protein 3, mitochondrial 
 cit-r.1  102630334  ALBINO3-like protein 2, chloroplastic 
 bdi-r.1  100839659  ALBINO3-like protein 2, chloroplastic 
 nta-r.1  107829158  ALBINO3-like protein 2, chloroplastic 
 nta-r.1  107803593  ALBINO3-like protein 2, chloroplastic 

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Top 50 coexpressed genes to CHLRE_08g373583v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g373583v5 (cre-r.1 coexpression data)

CoexMap"5719976"


creCHLRE_08g373583v5 | Entrez gene ID : 5719976
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 2 1 2 1 1 2 1 2 1 3 1 2 3 1 3 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072598 [list] [network] protein localization to chloroplast  (9 genes)  IEA  
GO:0010027 [list] [network] thylakoid membrane organization  (10 genes)  IEA  
GO:0051205 [list] [network] protein insertion into membrane  (14 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (43 genes)  IEA  
GO MF
GO:0032977 [list] [network] membrane insertase activity  (5 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042922121.1 [sequence] [blastp]
XP_042922122.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  plas 4,  mito 1,  pero 1  (predict for XP_042922121.1)
chlo 5,  plas 4,  mito 1,  pero 1  (predict for XP_042922122.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_042922121.1)
mito 2  (predict for XP_042922122.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cre-r.1
for
CHLRE_08g373583v5


cre-r.1
for
CHLRE_03g198150v5


ath-u.5
for
AT3G44370


ath-u.5
for
AT1G65080


gma-u.5
for
100797573


sly-u.5
for
101253961


sly-u.5
for
101246494


osa-u.5
for
4340267


zma-u.5
for
103638011


bra-r.6
for
103852215


bra-r.6
for
103873644


vvi-u.5
for
100247921


ppo-u.5
for
7456346


ppo-u.5
for
7478985


mtr-u.5
for
11416907


tae-r.2
for
123167000


tae-r.2
for
123157294


tae-r.2
for
123152548


hvu-r.1
for
123410831


ghi-r.1
for
107888790


ghi-r.1
for
107890438


bna-r.1
for
106452143


bna-r.1
for
106405996


bna-r.1
for
106347678


sbi-r.1
for
8076160


sot-r.1
for
107058921


sot-r.1
for
102599172


sot-r.1
for
102588589


cit-r.1
for
102630334


bdi-r.1
for
100839659


nta-r.1
for
107829158


nta-r.1
for
107803593



Ortholog ID: 6280
Species cre cre ath ath gma sly sly osa zma bra bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot sot sot cit bdi nta nta
Symbol CHLRE_08g373583v5 CHLRE_03g198150v5 AT3G44370 AT1G65080 LOC100797573 LOC101253961 LOC101246494 LOC4340267 LOC103638011 LOC103852215 LOC103873644 LOC100247921 LOC7456346 LOC7478985 LOC11416907 LOC123167000 LOC123157294 LOC123152548 LOC123410831 LOC107888790 LOC107890438 LOC106452143 LOC106405996 LOC106347678 LOC8076160 LOC107058921 LOC102599172 LOC102588589 LOC102630334 LOC100839659 LOC107829158 LOC107803593
Function* uncharacterized protein uncharacterized protein Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 3, mitochondrial ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic ALBINO3-like protein 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00562 Inositol phosphate metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719976 5718799 823562 842816 100797573 101253961 101246494 4340267 103638011 103852215 103873644 100247921 7456346 7478985 11416907 123167000 123157294 123152548 123410831 107888790 107890438 106452143 106405996 106347678 8076160 107058921 102599172 102588589 102630334 100839659 107829158 107803593
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