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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1  CHLRE_02g142900v5  uncharacterized protein 
 ath-u.5  TPR9  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100794609  SET and MYND domain-containing protein 4 
 gma-u.5  100783548  SET and MYND domain-containing protein 4 
 sly-u.5  101251364  uncharacterized LOC101251364 
 osa-u.5  4349066  uncharacterized LOC4349066 
 zma-u.5  100280288  uncharacterized LOC100280288 
 bra-r.6  103874779  SET and MYND domain-containing protein 4 
 vvi-u.5  100263830  uncharacterized LOC100263830 
 ppo-u.5  7472510  uncharacterized LOC7472510 
 mtr-u.5  11418507  SET and MYND domain-containing protein 4 
 tae-r.2  123048238  SET and MYND domain-containing protein 4 
 hvu-r.1  123433870  uncharacterized LOC123433870 
 ghi-r.1  121225522  SET and MYND domain-containing protein 4 
 ghi-r.1  107920175  SET and MYND domain-containing protein 4 
 bna-r.1  111214270  SET and MYND domain-containing protein 4-like 
 bna-r.1  106439948  SET and MYND domain-containing protein 4 
 bna-r.1  125609568  SET and MYND domain-containing protein 4-like 
 sbi-r.1  8065191  SET and MYND domain-containing protein DDB_G0284059 
 sot-r.1  102593056  SET and MYND domain-containing protein 4 
 cit-r.1  102613285  uncharacterized LOC102613285 
 bdi-r.1  112271522  small glutamine-rich tetratricopeptide repeat-containing protein beta-like 
 bdi-r.1  100821025  SET and MYND domain-containing protein 4 
 nta-r.1  107774132  uncharacterized LOC107774132 
 nta-r.1  142181709  uncharacterized LOC142181709 

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Top 50 coexpressed genes to CHLRE_02g142900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g142900v5 (cre-r.1 coexpression data)

CoexMap"5720454"


creCHLRE_02g142900v5 | Entrez gene ID : 5720454
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 1 1 2 3 1 1 1 2 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042927792.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_042927792.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042927792.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cre-r.1
for
CHLRE_02g142900v5


ath-u.5
for
TPR9


gma-u.5
for
100794609


gma-u.5
for
100783548


sly-u.5
for
101251364


osa-u.5
for
4349066


zma-u.5
for
100280288


bra-r.6
for
103874779


vvi-u.5
for
100263830


ppo-u.5
for
7472510


mtr-u.5
for
11418507


tae-r.2
for
123048238


hvu-r.1
for
123433870


ghi-r.1
for
121225522


ghi-r.1
for
107920175


bna-r.1
for
111214270


bna-r.1
for
106439948


bna-r.1
for
125609568


sbi-r.1
for
8065191


sot-r.1
for
102593056


cit-r.1
for
102613285


bdi-r.1
for
112271522


bdi-r.1
for
100821025


nta-r.1
for
107774132


nta-r.1
for
142181709



Ortholog ID: 9247
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna bna sbi sot cit bdi bdi nta nta
Symbol CHLRE_02g142900v5 TPR9 LOC100794609 LOC100783548 LOC101251364 LOC4349066 LOC100280288 LOC103874779 LOC100263830 LOC7472510 LOC11418507 LOC123048238 LOC123433870 LOC121225522 LOC107920175 LOC111214270 LOC106439948 LOC125609568 LOC8065191 LOC102593056 LOC102613285 LOC112271522 LOC100821025 LOC107774132 LOC142181709
Function* uncharacterized protein Tetratricopeptide repeat (TPR)-like superfamily protein SET and MYND domain-containing protein 4 SET and MYND domain-containing protein 4 uncharacterized LOC101251364 uncharacterized LOC4349066 uncharacterized LOC100280288 SET and MYND domain-containing protein 4 uncharacterized LOC100263830 uncharacterized LOC7472510 SET and MYND domain-containing protein 4 SET and MYND domain-containing protein 4 uncharacterized LOC123433870 SET and MYND domain-containing protein 4 SET and MYND domain-containing protein 4 SET and MYND domain-containing protein 4-like SET and MYND domain-containing protein 4 SET and MYND domain-containing protein 4-like SET and MYND domain-containing protein DDB_G0284059 SET and MYND domain-containing protein 4 uncharacterized LOC102613285 small glutamine-rich tetratricopeptide repeat-containing protein beta-like SET and MYND domain-containing protein 4 uncharacterized LOC107774132 uncharacterized LOC142181709
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00310 Lysine degradation 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi03015 mRNA surveillance pathway 3
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03430 Mismatch repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5720454 840233 100794609 100783548 101251364 4349066 100280288 103874779 100263830 7472510 11418507 123048238 123433870 121225522 107920175 111214270 106439948 125609568 8065191 102593056 102613285 112271522 100821025 107774132 142181709
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