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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g143600v5   uncharacterized protein 
 ath-u.5   SAC3C   SAC3/GANP/Nin1/mts3/eIF-3 p25 family 
 gma-u.5   100802804   SAC3 family protein C 
 sly-u.5   101268769   SAC3 family protein C 
 osa-u.5   4332850   SAC3 family protein C 
 zma-u.5   103639133   SAC3 family protein C 
 bra-r.6   103829981   SAC3 family protein C 
 vvi-u.5   100853276   SAC3 family protein C 
 ppo-u.5   7455786   SAC3 family protein C 
 mtr-u.5   11411805   SAC3 family protein C 
 mtr-u.5   11409757   uncharacterized LOC11409757 
 tae-r.2   123085828   SAC3 family protein C 
 tae-r.2   123133383   SAC3 family protein C 
 tae-r.2   123182040   SAC3 family protein C 
 hvu-r.1   123448671   SAC3 family protein C 
 ghi-r.1   107955352   SAC3 family protein C 
 ghi-r.1   107923404   SAC3 family protein C 
 bna-r.1   106407460   SAC3 family protein C 
 bna-r.1   106352862   SAC3 family protein C-like 
 sbi-r.1   8082650   SAC3 family protein C 
 sot-r.1   102606371   germinal-center associated nuclear protein 
 cit-r.1   102618115   SAC3 family protein C 
 bdi-r.1   100827100   SAC3 family protein C 
 nta-r.1   107806530   SAC3 family protein C-like 
 nta-r.1   107804417   SAC3 family protein C 

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Top 50 coexpressed genes to CHLRE_02g143600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g143600v5 (cre-r.1 coexpression data)

CoexMap"5720470"


creCHLRE_02g143600v5 | Entrez gene ID : 5720470    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 1 2 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (27 genes)  IEA  
GO CC
GO:0070390 [list] [network] transcription export complex 2  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
Protein XP_042927783.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  pero 3,  golg_plas 2,  chlo 2,  golg 1,  chlo_mito 1  (predict for XP_042927783.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_042927783.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g143600v5
ath-u.5
for
SAC3C
gma-u.5
for
100802804
sly-u.5
for
101268769
osa-u.5
for
4332850
zma-u.5
for
103639133
bra-r.6
for
103829981
vvi-u.5
for
100853276
ppo-u.5
for
7455786
mtr-u.5
for
11411805
mtr-u.5
for
11409757
tae-r.2
for
123085828
tae-r.2
for
123133383
tae-r.2
for
123182040
hvu-r.1
for
123448671
ghi-r.1
for
107955352
ghi-r.1
for
107923404
bna-r.1
for
106407460
bna-r.1
for
106352862
sbi-r.1
for
8082650
sot-r.1
for
102606371
cit-r.1
for
102618115
bdi-r.1
for
100827100
nta-r.1
for
107806530
nta-r.1
for
107804417


Ortholog ID: 7621
Species cre ath gma sly osa zma bra vvi vvi ppo mtr mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_02g143600v5 SAC3C LOC100802804 LOC101268769 LOC4332850 LOC103639133 LOC103829981 LOC100853276 LOC100259082 LOC7455786 LOC11411805 LOC11409757 LOC123085828 LOC123133383 LOC123182040 LOC123448671 LOC107955352 LOC107923404 LOC106407460 LOC106352862 LOC8082650 LOC102606371 LOC102618115 LOC100827100 LOC107806530 LOC107804417
Function* uncharacterized protein SAC3/GANP/Nin1/mts3/eIF-3 p25 family SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C uncharacterized LOC11409757 SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C SAC3 family protein C-like SAC3 family protein C germinal-center associated nuclear protein SAC3 family protein C SAC3 family protein C SAC3 family protein C-like SAC3 family protein C
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma04712 Circadian rhythm - plant 2
zma00562 Inositol phosphate metabolism 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00410 beta-Alanine metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00410 beta-Alanine metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5720470 824604 100802804 101268769 4332850 103639133 103829981 100853276 100259082 7455786 11411805 11409757 123085828 123133383 123182040 123448671 107955352 107923404 106407460 106352862 8082650 102606371 102618115 100827100 107806530 107804417
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