Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g399550v5   uncharacterized protein 
 cre-r.1   CHLRE_09g399915v5   uncharacterized protein 
 ath-u.5   RGLG1   RING domain ligase1 
 ath-u.5   RGLG2   RING domain ligase2 
 ath-u.5   AT1G67800   Copine (Calcium-dependent phospholipid-binding protein) family 
 gma-u.5   100798816   E3 ubiquitin-protein ligase RGLG5 
 gma-u.5   100820356   E3 ubiquitin-protein ligase RGLG5 
 gma-u.5   100819098   E3 ubiquitin-protein ligase RGLG2 
 sly-u.5   101249812   E3 ubiquitin-protein ligase RGLG2 
 sly-u.5   RFP1   E3 ubiquitin-protein ligase RGLG2-like 
 osa-u.5   4352002   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4341497   E3 ubiquitin-protein ligase RGLG2 
 zma-u.5   103631276   E3 ubiquitin-protein ligase RGLG2 
 zma-u.5   100279782   E3 ubiquitin-protein ligase RGLG1 
 zma-u.5   100279516   uncharacterized LOC100279516 
 bra-r.6   103856078   E3 ubiquitin-protein ligase RGLG2 
 bra-r.6   103850928   E3 ubiquitin-protein ligase RGLG2 
 bra-r.6   103846485   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100267987   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100255057   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100247388   E3 ubiquitin-protein ligase RGLG2 
 ppo-u.5   7453812   E3 ubiquitin-protein ligase RGLG2 
 ppo-u.5   7473198   E3 ubiquitin-protein ligase RGLG5 
 ppo-u.5   7484434   E3 ubiquitin-protein ligase RGLG2 
 mtr-u.5   11422178   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   11435543   E3 ubiquitin-protein ligase RGLG2 
 mtr-u.5   25501829   E3 ubiquitin-protein ligase RGLG5 
 tae-r.2   543024   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123062990   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123071878   E3 ubiquitin-protein ligase RGLG2 
 hvu-r.1   123411526   E3 ubiquitin-protein ligase RGLG5-like 
 hvu-r.1   123445154   E3 ubiquitin-protein ligase RGLG2-like 
 ghi-r.1   107959911   E3 ubiquitin-protein ligase RGLG2 
 ghi-r.1   107946581   E3 ubiquitin-protein ligase RGLG2 
 ghi-r.1   107908267   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106418626   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106367219   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106353976   E3 ubiquitin-protein ligase RGLG5 
 sbi-r.1   8078706   E3 ubiquitin-protein ligase RGLG2 
 sbi-r.1   110431341   E3 ubiquitin-protein ligase RGLG2-like 
 sot-r.1   102585646   E3 ubiquitin-protein ligase RGLG2-like 
 sot-r.1   102595336   E3 ubiquitin-protein ligase RGLG2-like 
 cit-r.1   102608772   E3 ubiquitin-protein ligase RGLG2 
 cit-r.1   102630950   E3 ubiquitin-protein ligase RGLG2-like 
 cit-r.1   102623356   E3 ubiquitin-protein ligase RGLG2 
 bdi-r.1   100833247   E3 ubiquitin-protein ligase RGLG3 
 bdi-r.1   100830193   E3 ubiquitin-protein ligase RGLG2 
 bdi-r.1   100830231   E3 ubiquitin-protein ligase RGLG2 
 nta-r.1   107827774   E3 ubiquitin-protein ligase RGLG1-like 
 nta-r.1   107784766   E3 ubiquitin-protein ligase RGLG2 
 nta-r.1   107793203   E3 ubiquitin-protein ligase RGLG2 

close


Top 50 coexpressed genes to CHLRE_09g399550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_09g399550v5 (cre-r.1 coexpression data)

CoexMap"5720678"


creCHLRE_09g399550v5 | Entrez gene ID : 5720678    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 3 3 2 2 3 3 3 3 3 3 2 3 3 2 2 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (136 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (132 genes)  IEA  
Protein XP_001695195.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_001695195.2)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_001695195.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g399550v5
cre-r.1
for
CHLRE_09g399915v5
ath-u.5
for
RGLG1
ath-u.5
for
RGLG2
ath-u.5
for
AT1G67800
gma-u.5
for
100798816
gma-u.5
for
100820356
gma-u.5
for
100819098
sly-u.5
for
101249812
sly-u.5
for
RFP1
osa-u.5
for
4352002
osa-u.5
for
4341497
zma-u.5
for
103631276
zma-u.5
for
100279782
zma-u.5
for
100279516
bra-r.6
for
103856078
bra-r.6
for
103850928
bra-r.6
for
103846485
vvi-u.5
for
100267987
vvi-u.5
for
100255057
vvi-u.5
for
100247388
ppo-u.5
for
7453812
ppo-u.5
for
7473198
ppo-u.5
for
7484434
mtr-u.5
for
11422178
mtr-u.5
for
11435543
mtr-u.5
for
25501829
tae-r.2
for
543024
tae-r.2
for
123062990
tae-r.2
for
123071878
hvu-r.1
for
123411526
hvu-r.1
for
123445154
ghi-r.1
for
107959911
ghi-r.1
for
107946581
ghi-r.1
for
107908267
bna-r.1
for
106418626
bna-r.1
for
106367219
bna-r.1
for
106353976
sbi-r.1
for
8078706
sbi-r.1
for
110431341
sot-r.1
for
102585646
sot-r.1
for
102595336
cit-r.1
for
102608772
cit-r.1
for
102630950
cit-r.1
for
102623356
bdi-r.1
for
100833247
bdi-r.1
for
100830193
bdi-r.1
for
100830231
nta-r.1
for
107827774
nta-r.1
for
107784766
nta-r.1
for
107793203


Ortholog ID: 954
Species cre cre ath ath ath gma gma gma sly sly osa osa zma zma zma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr tae tae hvu hvu ghi ghi ghi bna bna sbi sbi sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_09g399550v5 CHLRE_09g399915v5 RGLG1 RGLG2 AT1G67800 LOC100799565 LOC100787033 LOC100790800 LOC101249812 RFP1 LOC4352002 LOC4324990 LOC103631276 LOC100279516 LOC100281056 LOC103846485 LOC103839072 LOC103870996 LOC100255057 LOC100247388 LOC100251913 LOC7453812 LOC7473198 LOC7484434 LOC11435543 LOC25501829 LOC25489533 LOC543024 LOC123157038 LOC123411526 LOC123411523 LOC107892243 LOC107926092 LOC121224251 LOC106353976 LOC106406458 LOC8078706 LOC110431341 LOC102585646 LOC102595336 LOC102608772 LOC102630950 LOC102623356 LOC100833247 LOC100830193 LOC100830231 LOC107827774 LOC107793203 LOC107799607
Function* uncharacterized protein uncharacterized protein RING domain ligase1 RING domain ligase2 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 uncharacterized LOC100279516 copine-1 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG1 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG5-like E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG1-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04148 Efferocytosis 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 6
zma04148 Efferocytosis 3
zma03250 Viral life cycle - HIV-1 3
zma03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03010 Ribosome 2
ppo03060 Protein export 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae00590 Arachidonic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 3
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04626 Plant-pathogen interaction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 12
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5720678 66054764 819911 831293 843106 100799565 100787033 100790800 101249812 101258318 4352002 4324990 103631276 100279516 100281056 103846485 103839072 103870996 100255057 100247388 100251913 7453812 7473198 7484434 11435543 25501829 25489533 543024 123157038 123411526 123411523 107892243 107926092 121224251 106353976 106406458 8078706 110431341 102585646 102595336 102608772 102630950 102623356 100833247 100830193 100830231 107827774 107793203 107799607
The preparation time of this page was 0.6 [sec].