ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_09g402750v5	uncharacterized protein
ath-u.5	AT4G24840	oligomeric golgi complex subunit-like protein
gma-u.5	100800639	conserved oligomeric Golgi complex subunit 2
gma-u.5	100817096	conserved oligomeric Golgi complex subunit 2
sly-u.5	101246944	conserved oligomeric Golgi complex subunit 2
osa-u.5	4334786	conserved oligomeric Golgi complex subunit 2
zma-u.5	100383630	uncharacterized LOC100383630
zma-u.5	103625718	conserved oligomeric Golgi complex subunit 2
bra-r.6	103861510	conserved oligomeric Golgi complex subunit 2
bra-r.6	103856302	conserved oligomeric Golgi complex subunit 2
bra-r.6	103862661	conserved oligomeric Golgi complex subunit 2
vvi-u.5	100244076	conserved oligomeric Golgi complex subunit 2
ppo-u.5	7484468	conserved oligomeric Golgi complex subunit 2
ppo-u.5	7463119	conserved oligomeric Golgi complex subunit 2
mtr-u.5	11405570	conserved oligomeric Golgi complex subunit 2
tae-r.2	123123802	conserved oligomeric Golgi complex subunit 2
tae-r.2	123114316	conserved oligomeric Golgi complex subunit 2
tae-r.2	123087617	conserved oligomeric Golgi complex subunit 2
hvu-r.1	123395098	conserved oligomeric Golgi complex subunit 2
ghi-r.1	107912887	conserved oligomeric Golgi complex subunit 2
ghi-r.1	107895326	conserved oligomeric Golgi complex subunit 2
bna-r.1	106442734	conserved oligomeric Golgi complex subunit 2
bna-r.1	106442379	conserved oligomeric Golgi complex subunit 2
bna-r.1	106433820	conserved oligomeric Golgi complex subunit 2
sbi-r.1	8061643	conserved oligomeric Golgi complex subunit 2
sot-r.1	102588931	conserved oligomeric Golgi complex subunit 2
cit-r.1	102607838	conserved oligomeric Golgi complex subunit 2
bdi-r.1	100828570	conserved oligomeric Golgi complex subunit 2
nta-r.1	107818534	conserved oligomeric Golgi complex subunit 2
nta-r.1	107760573	conserved oligomeric Golgi complex subunit 2

Top 50 coexpressed genes to CHLRE_09g402750v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_09g402750v5 (cre-r.1 coexpression data)

CoexMap"5720734"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007030 [list] [network] Golgi organization	(16 genes)	IEA
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport	(19 genes)	IEA
GO:0015031 [list] [network] protein transport	(207 genes)	IEA

GO CC

GO:0017119 [list] [network] Golgi transport complex	(7 genes)	IEA
GO:0016020 [list] [network] membrane	(1543 genes)	IEA

GO MF

Protein

XP_042920765.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, cyto 2, plas 1, cyto_pero 1

(predict for XP_042920765.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042920765.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_09g402750v5	ath-u.5 for AT4G24840	gma-u.5 for 100800639	gma-u.5 for 100817096	sly-u.5 for 101246944	osa-u.5 for 4334786	zma-u.5 for 100383630	zma-u.5 for 103625718	bra-r.6 for 103861510	bra-r.6 for 103856302	bra-r.6 for 103862661	vvi-u.5 for 100244076	ppo-u.5 for 7484468	ppo-u.5 for 7463119	mtr-u.5 for 11405570	tae-r.2 for 123123802	tae-r.2 for 123114316	tae-r.2 for 123087617	hvu-r.1 for 123395098	ghi-r.1 for 107912887	ghi-r.1 for 107895326	bna-r.1 for 106442734	bna-r.1 for 106442379	bna-r.1 for 106433820	sbi-r.1 for 8061643	sot-r.1 for 102588931	cit-r.1 for 102607838	bdi-r.1 for 100828570	nta-r.1 for 107818534	nta-r.1 for 107760573

Ortholog

Ortholog ID: 6623

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

oligomeric golgi complex subunit-like protein

conserved oligomeric Golgi complex subunit 2

uncharacterized LOC100383630

conserved oligomeric Golgi complex subunit 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3
ath04142	Lysosome	2
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3
gma00010	Glycolysis / Gluconeogenesis	2
gma00051	Fructose and mannose metabolism	2
gma00052	Galactose metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	5
gma04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	4
zma04144	Endocytosis	4
zma05100	Bacterial invasion of epithelial cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	7
bra03060	Protein export	4
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	3
ppo04144	Endocytosis	3
ppo05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	5
tae04144	Endocytosis	5
tae05100	Bacterial invasion of epithelial cells	5
tae00051	Fructose and mannose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	9
tae04144	Endocytosis	7
tae05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	6
tae04144	Endocytosis	6
tae05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu05100	Bacterial invasion of epithelial cells	3
hvu04142	Lysosome	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	4
ghi04144	Endocytosis	3
ghi05100	Bacterial invasion of epithelial cells	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	4
ghi04144	Endocytosis	3
ghi05100	Bacterial invasion of epithelial cells	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	5
bna05100	Bacterial invasion of epithelial cells	5
bna04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	3
sot04144	Endocytosis	2
sot05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit04142	Lysosome	3
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	3
nta04142	Lysosome	2
nta05100	Bacterial invasion of epithelial cells	2
nta04977	Vitamin digestion and absorption	2

Expression

Expression pattern

Entrez Gene ID^*

5720734

828587

100800639

100817096

101246944

4334786

100383630

103625718

103861510

103856302

103862661

100244076

7484468

7463119

11405570

123123802

123114316

123087617

123395098

107912887

107895326

106433820

106375796

106410330

8061643

102588931

102607838

100828570

107818534

107760573

The preparation time of this page was 0.1 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	2	3	1	2	1	3	1	2	3	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_09g402750v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_09g402750v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**