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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g673953v5   uncharacterized protein 
 cre-r.1   CHLRE_08g380300v5   uncharacterized protein 
 cre-r.1   CHLRE_01g012150v5   uncharacterized protein 
 ath-u.5   PMSR4   peptide met sulfoxide reductase 4 
 ath-u.5   PMSR2   peptidemethionine sulfoxide reductase 2 
 ath-u.5   PMSR3   peptidemethionine sulfoxide reductase 3 
 gma-u.5   100792638   peptide methionine sulfoxide reductase-like 
 gma-u.5   100527085   uncharacterized LOC100527085 
 gma-u.5   100804748   peptide methionine sulfoxide reductase A4, chloroplastic-like 
 sly-u.5   MSRA   peptide methionine sulfoxide reductase 
 sly-u.5   MSRA4   methionine sulfoxide reductase A4 
 sly-u.5   MSRA3   methionine sulfoxide reductase A3 
 osa-u.5   4336192   peptide methionine sulfoxide reductase A2-1-like 
 osa-u.5   4349402   peptide methionine sulfoxide reductase A4, chloroplastic-like 
 osa-u.5   107277650   peptide methionine sulfoxide reductase A2-2 
 zma-u.5   100283982   peptide methionine sulfoxide reductase 
 zma-u.5   100285733   uncharacterized LOC100285733 
 bra-r.6   117125751   peptide methionine sulfoxide reductase A3-like 
 bra-r.6   103855728   peptide methionine sulfoxide reductase A3 
 vvi-u.5   100255310   peptide methionine sulfoxide reductase 
 vvi-u.5   100258013   peptide methionine sulfoxide reductase A1 
 ppo-u.5   7484440   peptide methionine sulfoxide reductase 
 ppo-u.5   18103860   peptide methionine sulfoxide reductase A1 
 ppo-u.5   18105852   peptide methionine sulfoxide reductase 
 mtr-u.5   11441522   peptide methionine sulfoxide reductase A1 
 mtr-u.5   11433534   peptide methionine sulfoxide reductase 
 mtr-u.5   25489521   peptide methionine sulfoxide reductase 
 tae-r.2   123045780   peptide methionine sulfoxide reductase A2-1 
 tae-r.2   123052275   peptide methionine sulfoxide reductase A4, chloroplastic 
 tae-r.2   123053668   peptide methionine sulfoxide reductase A2-1 
 hvu-r.1   123427032   peptide methionine sulfoxide reductase A2-1 
 hvu-r.1   123439234   peptide methionine sulfoxide reductase A4, chloroplastic-like 
 ghi-r.1   107955101   peptide methionine sulfoxide reductase A1 
 ghi-r.1   121232068   peptide methionine sulfoxide reductase 
 ghi-r.1   107949682   peptide methionine sulfoxide reductase A1 
 bna-r.1   106429334   peptide methionine sulfoxide reductase A3-like 
 bna-r.1   106405877   peptide methionine sulfoxide reductase A3 
 bna-r.1   106405872   peptide methionine sulfoxide reductase A2-like 
 sbi-r.1   8058735   peptide methionine sulfoxide reductase A2-1 
 sbi-r.1   8058738   peptide methionine sulfoxide reductase A2-1 
 sbi-r.1   8058067   peptide methionine sulfoxide reductase A4, chloroplastic 
 sot-r.1   102595927   peptide methionine sulfoxide reductase A3-like 
 sot-r.1   102601734   peptide methionine sulfoxide reductase 
 cit-r.1   102611573   peptide methionine sulfoxide reductase-like 
 cit-r.1   102628687   peptide methionine sulfoxide reductase A1 
 bdi-r.1   100824310   peptide methionine sulfoxide reductase A4, chloroplastic 
 bdi-r.1   100823222   peptide methionine sulfoxide reductase A2-1 
 nta-r.1   107817933   peptide methionine sulfoxide reductase 
 nta-r.1   107826180   peptide methionine sulfoxide reductase 
 nta-r.1   107807219   peptide methionine sulfoxide reductase A1-like 

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Top 50 coexpressed genes to CHLRE_16g673953v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g673953v5 (cre-r.1 coexpression data)

CoexMap"5721372"


creCHLRE_16g673953v5 | Entrez gene ID : 5721372    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 3 3 3 3 2 2 2 3 3 3 2 3 3 3 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (57 genes)  IEA  
Protein XP_042916191.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 2  (predict for XP_042916191.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_042916191.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g673953v5
cre-r.1
for
CHLRE_08g380300v5
cre-r.1
for
CHLRE_01g012150v5
ath-u.5
for
PMSR4
ath-u.5
for
PMSR2
ath-u.5
for
PMSR3
gma-u.5
for
100792638
gma-u.5
for
100527085
gma-u.5
for
100804748
sly-u.5
for
MSRA
sly-u.5
for
MSRA4
sly-u.5
for
MSRA3
osa-u.5
for
4336192
osa-u.5
for
4349402
osa-u.5
for
107277650
zma-u.5
for
100283982
zma-u.5
for
100285733
bra-r.6
for
117125751
bra-r.6
for
103855728
vvi-u.5
for
100255310
vvi-u.5
for
100258013
ppo-u.5
for
7484440
ppo-u.5
for
18103860
ppo-u.5
for
18105852
mtr-u.5
for
11441522
mtr-u.5
for
11433534
mtr-u.5
for
25489521
tae-r.2
for
123045780
tae-r.2
for
123052275
tae-r.2
for
123053668
hvu-r.1
for
123427032
hvu-r.1
for
123439234
ghi-r.1
for
107955101
ghi-r.1
for
121232068
ghi-r.1
for
107949682
bna-r.1
for
106429334
bna-r.1
for
106405877
bna-r.1
for
106405872
sbi-r.1
for
8058735
sbi-r.1
for
8058738
sbi-r.1
for
8058067
sot-r.1
for
102595927
sot-r.1
for
102601734
cit-r.1
for
102611573
cit-r.1
for
102628687
bdi-r.1
for
100824310
bdi-r.1
for
100823222
nta-r.1
for
107817933
nta-r.1
for
107826180
nta-r.1
for
107807219


Ortholog ID: 1183
Species cre cre cre ath ath ath gma gma gma sly sly sly osa osa osa zma zma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna sbi sbi sbi sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_16g673953v5 CHLRE_08g380300v5 CHLRE_01g012150v5 PMSR2 PMSR3 PMSR1 LOC100792638 LOC100804748 LOC100796273 MSRA MSRA4 MSRA3 LOC4336192 LOC4349402 LOC107277650 LOC100283982 LOC100285733 LOC103855728 LOC103861530 LOC103855727 LOC100255310 LOC100258013 LOC7484440 LOC18103860 LOC18109890 LOC11441522 LOC11433534 LOC25489521 LOC123053668 LOC123181664 LOC123189550 LOC123427032 LOC123439234 LOC107947333 LOC107933456 LOC121219338 LOC106346565 LOC106442570 LOC8058735 LOC8058738 LOC8058067 LOC102595927 LOC102601734 LOC102611573 LOC102628687 LOC100824310 LOC100823222 LOC107826180 LOC107805741 LOC107772726
Function* uncharacterized protein uncharacterized protein uncharacterized protein peptidemethionine sulfoxide reductase 2 peptidemethionine sulfoxide reductase 3 peptidemethionine sulfoxide reductase 1 peptide methionine sulfoxide reductase-like peptide methionine sulfoxide reductase A4, chloroplastic-like peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase methionine sulfoxide reductase A4 methionine sulfoxide reductase A3 peptide methionine sulfoxide reductase A2-1-like peptide methionine sulfoxide reductase A4, chloroplastic-like peptide methionine sulfoxide reductase A2-2 peptide methionine sulfoxide reductase uncharacterized LOC100285733 peptide methionine sulfoxide reductase A3 peptide methionine sulfoxide reductase A4, chloroplastic peptide methionine sulfoxide reductase A3 peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase A2-1 peptide methionine sulfoxide reductase A4, chloroplastic peptide methionine sulfoxide reductase A2-1 peptide methionine sulfoxide reductase A2-1 peptide methionine sulfoxide reductase A4, chloroplastic-like peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase A2-1 peptide methionine sulfoxide reductase A2-1 peptide methionine sulfoxide reductase A4, chloroplastic peptide methionine sulfoxide reductase A3-like peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase-like peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase A4, chloroplastic peptide methionine sulfoxide reductase A2-1 peptide methionine sulfoxide reductase peptide methionine sulfoxide reductase A1 peptide methionine sulfoxide reductase A1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 5
cre01240 Biosynthesis of cofactors 3
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 7
ath00380 Tryptophan metabolism 6
ath01210 2-Oxocarboxylic acid metabolism 6
ath00920 Sulfur metabolism 3
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00920 Sulfur metabolism 2
bra01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00730 Thiamine metabolism 3
vvi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00920 Sulfur metabolism 4
ppo01320 Sulfur cycle 4
ppo00230 Purine metabolism 2
ppo00261 Monobactam biosynthesis 2
ppo00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00630 Glyoxylate and dicarboxylate metabolism 5
ppo00250 Alanine, aspartate and glutamate metabolism 3
ppo00260 Glycine, serine and threonine metabolism 3
ppo01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 3
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00260 Glycine, serine and threonine metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
bna00730 Thiamine metabolism 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 3
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00450 Selenocompound metabolism 2
bdi00920 Sulfur metabolism 2
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00564 Glycerophospholipid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721372 5719873 5715047 830637 830638 836286 100792638 100804748 100796273 101253577 101268169 101251480 4336192 4349402 107277650 100283982 100285733 103855728 103861530 103855727 100255310 100258013 7484440 18103860 18109890 11441522 11433534 25489521 123053668 123181664 123189550 123427032 123439234 107947333 107933456 121219338 106346565 106442570 8058735 8058738 8058067 102595927 102601734 102611573 102628687 100824310 100823222 107826180 107805741 107772726
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