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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g673650v5   uncharacterized protein 
 ath-u.5   LHCB5   light harvesting complex of photosystem II 5 
 gma-u.5   100820327   chlorophyll a-b binding protein CP26, chloroplastic 
 gma-u.5   100817348   chlorophyll a-b binding protein CP26, chloroplastic 
 gma-u.5   100806585   chlorophyll a-b binding protein CP26 
 sly-u.5   CAB9   chlorophyll a-b binding protein Cab9 
 osa-u.5   4350176   chlorophyll a-b binding protein CP26, chloroplastic 
 zma-u.5   542320   chlorophyll a/b-binding apoprotein CP26 precursor 
 zma-u.5   542716   light harvesting chlorophyll a/b binding protein 5 
 bra-r.6   103858561   chlorophyll a-b binding protein CP26, chloroplastic 
 bra-r.6   103838910   chlorophyll a-b binding protein CP26, chloroplastic 
 vvi-u.5   100246457   chlorophyll a-b binding protein CP26, chloroplastic 
 ppo-u.5   112325791   chlorophyll a-b binding protein CP26, chloroplastic 
 mtr-u.5   25496571   chlorophyll a-b binding protein CP26, chloroplastic 
 tae-r.2   123086754   chlorophyll a-b binding protein CP26, chloroplastic 
 tae-r.2   123091226   chlorophyll a-b binding protein CP26, chloroplastic 
 tae-r.2   123096214   chlorophyll a-b binding protein CP26, chloroplastic 
 hvu-r.1   123447837   chlorophyll a-b binding protein CP26, chloroplastic 
 ghi-r.1   107896105   chlorophyll a-b binding protein CP26, chloroplastic 
 ghi-r.1   107959556   chlorophyll a-b binding protein CP26, chloroplastic 
 ghi-r.1   107915711   chlorophyll a-b binding protein CP26, chloroplastic 
 bna-r.1   106391791   chlorophyll a-b binding protein CP26, chloroplastic 
 bna-r.1   106440450   chlorophyll a-b binding protein CP26, chloroplastic-like 
 bna-r.1   106376306   chlorophyll a-b binding protein CP26, chloroplastic-like 
 sbi-r.1   8057152   chlorophyll a-b binding protein CP26, chloroplastic 
 sot-r.1   102584316   chlorophyll a-b binding protein CP26, chloroplastic 
 cit-r.1   102609195   chlorophyll a-b binding protein CP26, chloroplastic 
 bdi-r.1   100821549   chlorophyll a-b binding protein CP26, chloroplastic 
 nta-r.1   107818087   chlorophyll a-b binding protein CP26, chloroplastic 
 nta-r.1   107782430   chlorophyll a-b binding protein CP26, chloroplastic 

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Top 50 coexpressed genes to CHLRE_16g673650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g673650v5 (cre-r.1 coexpression data)

CoexMap"5721428"


creCHLRE_16g673650v5 | Entrez gene ID : 5721428      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 1 2 2 1 1 1 3 1 3 3 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00196 [list] [network] Photosynthesis - antenna proteins (20 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (25 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (39 genes)  IEA  
GO CC
GO:0010287 [list] [network] plastoglobule  (14 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (43 genes)  IEA  
GO MF
Protein XP_001695927.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_001695927.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_001695927.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g673650v5
ath-u.5
for
LHCB5
gma-u.5
for
100820327
gma-u.5
for
100817348
gma-u.5
for
100806585
sly-u.5
for
CAB9
osa-u.5
for
4350176
zma-u.5
for
542320
zma-u.5
for
542716
bra-r.6
for
103858561
bra-r.6
for
103838910
vvi-u.5
for
100246457
ppo-u.5
for
112325791
mtr-u.5
for
25496571
tae-r.2
for
123086754
tae-r.2
for
123091226
tae-r.2
for
123096214
hvu-r.1
for
123447837
ghi-r.1
for
107896105
ghi-r.1
for
107959556
ghi-r.1
for
107915711
bna-r.1
for
106391791
bna-r.1
for
106440450
bna-r.1
for
106376306
sbi-r.1
for
8057152
sot-r.1
for
102584316
cit-r.1
for
102609195
bdi-r.1
for
100821549
nta-r.1
for
107818087
nta-r.1
for
107782430


Ortholog ID: 6297
Species cre ath gma gma gma sly osa zma zma bra bra vvi ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_16g673650v5 LHCB5 LOC100820327 LOC100806585 LOC100789786 CAB9 LOC4350176 LOC542320 LOC542716 LOC103858561 LOC103838910 LOC100246457 LOC112325791 LOC25496571 LOC123086754 LOC123091226 LOC123096214 LOC123447837 LOC107896105 LOC107959556 LOC107914060 LOC106440450 LOC106376306 LOC106438825 LOC8057152 LOC102584316 LOC102609195 LOC100821549 LOC107818087 LOC107782430
Function* uncharacterized protein light harvesting complex of photosystem II 5 chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26 chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein Cab9 chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a/b-binding apoprotein CP26 precursor light harvesting chlorophyll a/b binding protein 5 chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic-like chlorophyll a-b binding protein CP26, chloroplastic-like chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic chlorophyll a-b binding protein CP26, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 10
cre00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 9
ath00196 Photosynthesis - antenna proteins 8
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 9
gma00195 Photosynthesis 4
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 17
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 18
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 12
sly00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 12
osa00195 Photosynthesis 3
osa00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 15
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 11
zma00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 8
bra00195 Photosynthesis 7
bra00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 8
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 10
vvi00195 Photosynthesis 6
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 8
mtr00195 Photosynthesis 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 13
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 15
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 9
hvu00195 Photosynthesis 4
hvu01200 Carbon metabolism 3
hvu00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 13
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 16
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 16
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 11
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 6
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 6
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 10
sot00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 8
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 13
bdi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 9
nta00196 Photosynthesis - antenna proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721428 826626 100820327 100806585 100789786 101266527 4350176 542320 542716 103858561 103838910 100246457 112325791 25496571 123086754 123091226 123096214 123447837 107896105 107959556 107914060 106440450 106376306 106438825 8057152 102584316 102609195 100821549 107818087 107782430
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