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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g675250v5   uncharacterized protein 
 ath-u.5   AT4G31050   Biotin/lipoate A/B protein ligase family 
 gma-u.5   100797208   octanoyltransferase LIP2p, chloroplastic 
 gma-u.5   100802770   octanoyltransferase LIP2p, chloroplastic 
 sly-u.5   101244660   octanoyltransferase LIP2p, chloroplastic 
 osa-u.5   4352692   octanoyltransferase LIP2p, chloroplastic 
 zma-u.5   100272694   uncharacterized LOC100272694 
 bra-r.6   103852129   octanoyltransferase LIP2p, chloroplastic 
 bra-r.6   103834637   octanoyltransferase LIP2p, chloroplastic 
 vvi-u.5   100251103   biotin/lipoate A/B protein ligase family-like 
 ppo-u.5   112326506   octanoyltransferase LIP2p, chloroplastic 
 mtr-u.5   25490168   octanoyltransferase LIP2p, chloroplastic 
 tae-r.2   123069013   octanoyltransferase LIP2p2, chloroplastic 
 hvu-r.1   123396497   octanoyltransferase LIP2p2, chloroplastic-like 
 ghi-r.1   107905385   octanoyltransferase LIP2p, chloroplastic 
 ghi-r.1   107942000   octanoyltransferase LIP2p, chloroplastic 
 sbi-r.1   8069736   plastidial lipoyltransferase 2 
 sot-r.1   102589650   plastidial lipoyltransferase 2 
 cit-r.1   102610869   octanoyltransferase LIP2p, chloroplastic 
 bdi-r.1   100840125   plastidial lipoyltransferase 2 
 nta-r.1   107790027   octanoyltransferase LIP2p, chloroplastic 
 nta-r.1   107822010   octanoyltransferase LIP2p, chloroplastic 

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Top 50 coexpressed genes to CHLRE_16g675250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g675250v5 (cre-r.1 coexpression data)

CoexMap"5721459"


creCHLRE_16g675250v5 | Entrez gene ID : 5721459    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi sbi sot cit bdi nta bna
Paralog 1 1 2 1 1 1 2 1 1 1 1 1 2 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00785 [list] [network] Lipoic acid metabolism (21 genes)
cre01240 [list] [network] Biosynthesis of cofactors (149 genes)
GO BP
GO:0009249 [list] [network] protein lipoylation  (3 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0033819 [list] [network] lipoyl(octanoyl) transferase activity  (2 genes)  IEA  
Protein XP_001695940.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_001695940.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_001695940.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g675250v5
ath-u.5
for
AT4G31050
gma-u.5
for
100797208
gma-u.5
for
100802770
sly-u.5
for
101244660
osa-u.5
for
4352692
zma-u.5
for
100272694
bra-r.6
for
103852129
bra-r.6
for
103834637
vvi-u.5
for
100251103
ppo-u.5
for
112326506
mtr-u.5
for
25490168
tae-r.2
for
123069013
hvu-r.1
for
123396497
ghi-r.1
for
107905385
ghi-r.1
for
107942000
sbi-r.1
for
8069736
sot-r.1
for
102589650
cit-r.1
for
102610869
bdi-r.1
for
100840125
nta-r.1
for
107790027
nta-r.1
for
107822010


Ortholog ID: 7685
Species cre ath gma gma sly osa zma bra bra vvi ppo mtr tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol CHLRE_16g675250v5 AT4G31050 LOC100797208 LOC100802770 LOC101244660 LOC4352692 LOC100272694 LOC103852129 LOC103834637 LOC100251103 LOC112326506 LOC25490168 LOC123069013 LOC123396497 LOC107905385 LOC107942000 LOC8069736 LOC102589650 LOC102610869 LOC100840125 LOC107790027 LOC107822010
Function* uncharacterized protein Biotin/lipoate A/B protein ligase family octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic uncharacterized LOC100272694 octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic biotin/lipoate A/B protein ligase family-like octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p2, chloroplastic octanoyltransferase LIP2p2, chloroplastic-like octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic plastidial lipoyltransferase 2 plastidial lipoyltransferase 2 octanoyltransferase LIP2p, chloroplastic plastidial lipoyltransferase 2 octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 3
zma01212 Fatty acid metabolism 3
zma01240 Biosynthesis of cofactors 2
zma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00785 Lipoic acid metabolism 4
ppo01200 Carbon metabolism 3
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00860 Porphyrin metabolism 3
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi03010 Ribosome 2
ghi00785 Lipoic acid metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 3
nta04382 Cornified envelope formation 3
nta03015 mRNA surveillance pathway 2
nta00785 Lipoic acid metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00785 Lipoic acid metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721459 829232 100797208 100802770 101244660 4352692 100272694 103852129 103834637 100251103 112326506 25490168 123069013 123396497 107905385 107942000 8069736 102589650 102610869 100840125 107790027 107822010
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