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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g275350v5   uncharacterized protein 
 ath-u.5   RVE2   Homeodomain-like superfamily protein 
 ath-u.5   EPR1   Homeodomain-like superfamily protein 
 ath-u.5   AT3G10113   Homeodomain-like superfamily protein 
 gma-u.5   100101861   protein REVEILLE 7-like 
 gma-u.5   100785040   protein REVEILLE 1 
 gma-u.5   MYB173   MYB transcription factor MYB173 
 sly-u.5   101261079   protein REVEILLE 1 
 sly-u.5   101255972   protein REVEILLE 7 
 osa-u.5   4330349   protein REVEILLE 1 
 osa-u.5   4342135   protein REVEILLE 1 
 osa-u.5   4336779   uncharacterized LOC4336779 
 zma-u.5   100276850   uncharacterized LOC100276850 
 zma-u.5   100273616   uncharacterized LOC100273616 
 zma-u.5   100273483   uncharacterized LOC100273483 
 bra-r.6   103851098   protein REVEILLE 1 
 bra-r.6   103846255   protein REVEILLE 1 
 bra-r.6   103868317   protein REVEILLE 2 
 vvi-u.5   100263252   protein REVEILLE 1 
 ppo-u.5   18106485   protein REVEILLE 1 
 ppo-u.5   18105607   protein REVEILLE 7 
 ppo-u.5   7485192   protein REVEILLE 7 
 mtr-u.5   11427268   protein REVEILLE 1 
 mtr-u.5   25497345   protein REVEILLE 7 
 tae-r.2   123046701   protein REVEILLE 7 
 tae-r.2   123159960   protein LHY 
 tae-r.2   123054556   protein REVEILLE 7 
 hvu-r.1   123407640   protein LHY-like 
 hvu-r.1   123427840   protein REVEILLE 1-like 
 hvu-r.1   123401551   protein REVEILLE 1-like 
 ghi-r.1   121211262   protein REVEILLE 7 
 ghi-r.1   107904753   protein REVEILLE 7 
 ghi-r.1   107926642   protein REVEILLE 2 
 bna-r.1   111202817   protein REVEILLE 1-like 
 bna-r.1   111211014   protein REVEILLE 1 
 bna-r.1   111214517   protein REVEILLE 7-like 
 sbi-r.1   110431210   uncharacterized LOC110431210 
 sbi-r.1   8073204   uncharacterized LOC8073204 
 sbi-r.1   8060442   uncharacterized LOC8060442 
 sot-r.1   102602066   protein REVEILLE 1 
 cit-r.1   102630458   protein REVEILLE 1 
 cit-r.1   102614255   protein REVEILLE 7-like 
 bdi-r.1   100829508   myb-like protein H 
 bdi-r.1   100837761   protein REVEILLE 2 
 bdi-r.1   100842816   protein REVEILLE 7-like 
 nta-r.1   107774404   protein REVEILLE 1 
 nta-r.1   107806142   uncharacterized LOC107806142 
 nta-r.1   107801057   protein REVEILLE 1-like 

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Top 50 coexpressed genes to CHLRE_06g275350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g275350v5 (cre-r.1 coexpression data)

CoexMap"5721757"


creCHLRE_06g275350v5 | Entrez gene ID : 5721757    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 3 3 2 3 3 3 1 3 2 3 3 3 3 3 1 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042923708.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042923708.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_042923708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g275350v5
ath-u.5
for
RVE2
ath-u.5
for
EPR1
ath-u.5
for
AT3G10113
gma-u.5
for
100101861
gma-u.5
for
100785040
gma-u.5
for
MYB173
sly-u.5
for
101261079
sly-u.5
for
101255972
osa-u.5
for
4330349
osa-u.5
for
4342135
osa-u.5
for
4336779
zma-u.5
for
100276850
zma-u.5
for
100273616
zma-u.5
for
100273483
bra-r.6
for
103851098
bra-r.6
for
103846255
bra-r.6
for
103868317
vvi-u.5
for
100263252
ppo-u.5
for
18106485
ppo-u.5
for
18105607
ppo-u.5
for
7485192
mtr-u.5
for
11427268
mtr-u.5
for
25497345
tae-r.2
for
123046701
tae-r.2
for
123159960
tae-r.2
for
123054556
hvu-r.1
for
123407640
hvu-r.1
for
123427840
hvu-r.1
for
123401551
ghi-r.1
for
121211262
ghi-r.1
for
107904753
ghi-r.1
for
107926642
bna-r.1
for
111202817
bna-r.1
for
111211014
bna-r.1
for
111214517
sbi-r.1
for
110431210
sbi-r.1
for
8073204
sbi-r.1
for
8060442
sot-r.1
for
102602066
cit-r.1
for
102630458
cit-r.1
for
102614255
bdi-r.1
for
100829508
bdi-r.1
for
100837761
bdi-r.1
for
100842816
nta-r.1
for
107774404
nta-r.1
for
107806142
nta-r.1
for
107801057


Ortholog ID: 1576
Species cre ath ath ath gma gma gma sly sly osa osa osa zma zma zma bra bra bra vvi ppo ppo ppo mtr mtr tae tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_06g275350v5 RVE2 EPR1 RVE1 MYB173 LOC778089 MYB177 LOC101261079 LOC101255972 LOC4330349 LOC4342135 LOC4336779 LOC100276850 LOC100273483 LOC100279070 LOC103851098 LOC103846255 EPR1 LOC100263252 LOC18106485 LOC18105607 LOC7485192 LOC11427268 LOC25497345 LOC123046701 LOC100873110 LOC123190414 LOC123407640 LOC123427840 LOC123401551 LOC121211262 LOC107926642 LOC107953319 LOC111202817 LOC111211014 LOC106387719 LOC110431210 LOC8073204 LOC8060442 LOC102602066 LOC102630458 LOC102614255 LOC100829508 LOC100837761 LOC100842816 LOC107796078 LOC107784585 LOC107812899
Function* uncharacterized protein Homeodomain-like superfamily protein Homeodomain-like superfamily protein Homeodomain-like superfamily protein MYB transcription factor MYB173 protein REVEILLE 7 MYB transcription factor MYB177 protein REVEILLE 1 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 1 uncharacterized LOC4336779 uncharacterized LOC100276850 uncharacterized LOC100273483 uncharacterized LOC100279070 protein REVEILLE 1 protein REVEILLE 1 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 1 protein REVEILLE 7 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 7 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 2 protein LHY-like protein REVEILLE 1-like protein REVEILLE 1-like protein REVEILLE 7 protein REVEILLE 2 protein REVEILLE 7 protein REVEILLE 1-like protein REVEILLE 1 protein REVEILLE 1 uncharacterized LOC110431210 uncharacterized LOC8073204 uncharacterized LOC8060442 protein REVEILLE 1 protein REVEILLE 1 protein REVEILLE 7-like myb-like protein H protein REVEILLE 2 protein REVEILLE 7-like uncharacterized LOC107796078 protein REVEILLE 1 uncharacterized LOC107812899
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr00270 Cysteine and methionine metabolism 2
mtr00330 Arginine and proline metabolism 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721757 833700 838413 831595 778058 778089 778060 101261079 101255972 4330349 4342135 4336779 100276850 100273483 100279070 103851098 103846255 103872597 100263252 18106485 18105607 7485192 11427268 25497345 123046701 100873110 123190414 123407640 123427840 123401551 121211262 107926642 107953319 111202817 111211014 106387719 110431210 8073204 8060442 102602066 102630458 102614255 100829508 100837761 100842816 107796078 107784585 107812899
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