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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g271100v5   uncharacterized protein 
 cre-r.1   CHLRE_13g575650v5   uncharacterized protein 
 cre-r.1   CHLRE_07g355400v5   uncharacterized protein 
 ath-u.5   AT5G63370   Protein kinase superfamily protein 
 ath-u.5   AT1G67580   Protein kinase superfamily protein 
 gma-u.5   100814438   cyclin-dependent kinase G-2 
 gma-u.5   100812800   cyclin-dependent kinase G-2 
 gma-u.5   100808571   cyclin-dependent kinase G-2 
 sly-u.5   101262718   cyclin-dependent kinase G-2 
 osa-u.5   4336224   cyclin-dependent kinase G-2-like 
 osa-u.5   4329899   cyclin-dependent kinase G-1-like 
 zma-u.5   103627383   cyclin-dependent kinase G-1-like 
 zma-u.5   103641791   cyclin-dependent kinase G-2-like 
 zma-u.5   100501339   uncharacterized LOC100501339 
 bra-r.6   103831182   cyclin-dependent kinase G-2 
 bra-r.6   103855039   cyclin-dependent kinase G1 
 bra-r.6   103873528   cyclin-dependent kinase G1 
 vvi-u.5   100250978   cyclin-dependent kinase G-2 
 vvi-u.5   100246062   cyclin-dependent kinase G-2 
 ppo-u.5   7460029   cyclin-dependent kinase G-2 
 ppo-u.5   7494784   cyclin-dependent kinase G-2 
 ppo-u.5   7484460   cyclin-dependent kinase G1 
 mtr-u.5   11437311   cyclin-dependent kinase G-2 
 mtr-u.5   11441064   cyclin-dependent kinase G-2 
 mtr-u.5   25501719   cyclin-dependent kinase G-2 
 tae-r.2   123137392   cyclin-dependent kinase G-1 
 tae-r.2   123189590   cyclin-dependent kinase G-2 
 tae-r.2   123127629   cyclin-dependent kinase G-1 
 hvu-r.1   123427070   cyclin-dependent kinase G-2-like 
 hvu-r.1   123403399   cyclin-dependent kinase G-1-like 
 ghi-r.1   107898634   cyclin-dependent kinase G-2 
 ghi-r.1   107933368   cyclin-dependent kinase G-2 
 ghi-r.1   121211065   cyclin-dependent kinase G-2 
 bna-r.1   125605186   cyclin-dependent kinase G1-like 
 bna-r.1   106454214   cyclin-dependent kinase G-2 
 bna-r.1   106405332   cyclin-dependent kinase G1 
 sbi-r.1   110436093   cyclin-dependent kinase G-2 
 sbi-r.1   8072422   cyclin-dependent kinase G-1 
 sot-r.1   102584026   cyclin-dependent kinase G-2 
 sot-r.1   102588701   cyclin-dependent kinase G-2-like 
 cit-r.1   102610073   cyclin-dependent kinase G-2 
 cit-r.1   102619419   cyclin-dependent kinase G-2 
 bdi-r.1   100831093   cyclin-dependent kinase G-2 
 bdi-r.1   100836577   cyclin-dependent kinase G-1 
 nta-r.1   107820065   cyclin-dependent kinase G-2 
 nta-r.1   107817252   cyclin-dependent kinase G-2 
 nta-r.1   107803236   cyclin-dependent kinase G-2 

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Top 50 coexpressed genes to CHLRE_06g271100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g271100v5 (cre-r.1 coexpression data)

CoexMap"5721840"


creCHLRE_06g271100v5 | Entrez gene ID : 5721840      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 2 3 1 2 3 3 2 3 3 3 2 3 3 2 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000082 [list] [network] G1/S transition of mitotic cell cycle  (6 genes)  IEA  
GO:0051445 [list] [network] regulation of meiotic cell cycle  (7 genes)  IEA  
GO:0010389 [list] [network] regulation of G2/M transition of mitotic cell cycle  (16 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (396 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (624 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (662 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (27 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0030332 [list] [network] cyclin binding  (6 genes)  IEA  
GO:0004693 [list] [network] cyclin-dependent protein serine/threonine kinase activity  (13 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001696492.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 8,  cyto 1  (predict for XP_001696492.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001696492.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g271100v5
cre-r.1
for
CHLRE_13g575650v5
cre-r.1
for
CHLRE_07g355400v5
ath-u.5
for
AT5G63370
ath-u.5
for
AT1G67580
gma-u.5
for
100814438
gma-u.5
for
100812800
gma-u.5
for
100808571
sly-u.5
for
101262718
osa-u.5
for
4336224
osa-u.5
for
4329899
zma-u.5
for
103627383
zma-u.5
for
103641791
zma-u.5
for
100501339
bra-r.6
for
103831182
bra-r.6
for
103855039
bra-r.6
for
103873528
vvi-u.5
for
100250978
vvi-u.5
for
100246062
ppo-u.5
for
7460029
ppo-u.5
for
7494784
ppo-u.5
for
7484460
mtr-u.5
for
11437311
mtr-u.5
for
11441064
mtr-u.5
for
25501719
tae-r.2
for
123137392
tae-r.2
for
123189590
tae-r.2
for
123127629
hvu-r.1
for
123427070
hvu-r.1
for
123403399
ghi-r.1
for
107898634
ghi-r.1
for
107933368
ghi-r.1
for
121211065
bna-r.1
for
125605186
bna-r.1
for
106454214
bna-r.1
for
106405332
sbi-r.1
for
110436093
sbi-r.1
for
8072422
sot-r.1
for
102584026
sot-r.1
for
102588701
cit-r.1
for
102610073
cit-r.1
for
102619419
bdi-r.1
for
100831093
bdi-r.1
for
100836577
nta-r.1
for
107820065
nta-r.1
for
107817252
nta-r.1
for
107803236


Ortholog ID: 2180
Species cre cre ath ath gma gma gma sly osa osa zma zma zma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_13g575650v5 CHLRE_07g355400v5 AT5G63370 AT1G67580 LOC100814438 LOC100812800 LOC100788840 LOC101262718 LOC4336224 LOC4329899 LOC103627383 LOC103641791 LOC100501339 LOC103831182 LOC103855039 LOC103873528 LOC100250978 LOC100246062 LOC7460029 LOC7494784 LOC7484460 LOC11437311 LOC11441064 LOC25501719 LOC123189590 LOC123127629 LOC123144736 LOC123427070 LOC123403399 LOC107898634 LOC107933368 LOC121232053 LOC106406167 LOC125574926 LOC125582893 LOC110436093 LOC8072422 LOC102584026 LOC102588701 LOC102610073 LOC102619419 LOC100831093 LOC100836577 LOC107820065 LOC107817252 LOC107826481
Function* uncharacterized protein uncharacterized protein Protein kinase superfamily protein Protein kinase superfamily protein cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2-like cyclin-dependent kinase G-1-like cyclin-dependent kinase G-1-like cyclin-dependent kinase G-2-like uncharacterized LOC100501339 cyclin-dependent kinase G-2 cyclin-dependent kinase G1 cyclin-dependent kinase G1 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G1 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-1 cyclin-dependent kinase G-1 cyclin-dependent kinase G-2-like cyclin-dependent kinase G-1-like cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase 10 cyclin-dependent kinase G-2 cyclin-dependent kinase G1-like cyclin-dependent kinase G1-like cyclin-dependent kinase G-2 cyclin-dependent kinase G-1 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2-like cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-1 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2 cyclin-dependent kinase G-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi04146 Peroxisome 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00785 Lipoic acid metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719226 5727610 836456 843079 100814438 100812800 100788840 101262718 4336224 4329899 103627383 103641791 100501339 103831182 103855039 103873528 100250978 100246062 7460029 7494784 7484460 11437311 11441064 25501719 123189590 123127629 123144736 123427070 123403399 107898634 107933368 121232053 106406167 125574926 125582893 110436093 8072422 102584026 102588701 102610073 102619419 100831093 100836577 107820065 107817252 107826481
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