ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g263602v5	uncharacterized protein
ath-u.5	PEX12	peroxin-12
gma-u.5	100814145	peroxisome biogenesis protein 12
gma-u.5	100804330	peroxisome biogenesis protein 12
sly-u.5	101252586	peroxisome biogenesis protein 12
osa-u.5	4348849	peroxisome biogenesis protein 12
bra-r.6	103859036	peroxisome biogenesis protein 12
bra-r.6	103848917	peroxisome biogenesis protein 12
vvi-u.5	100257920	peroxisome biogenesis protein 12
ppo-u.5	7465944	peroxisome biogenesis protein 12
mtr-u.5	11421943	peroxisome biogenesis protein 12
tae-r.2	123180991	peroxisome biogenesis protein 12
tae-r.2	123120682	peroxisome biogenesis protein 12
tae-r.2	123045054	peroxisome biogenesis protein 12
hvu-r.1	123430537	peroxisome biogenesis protein 12
ghi-r.1	107928763	peroxisome biogenesis protein 12
ghi-r.1	107892668	peroxisome biogenesis protein 12
bna-r.1	106438982	peroxisome biogenesis protein 12
bna-r.1	106447632	peroxisome biogenesis protein 12
sbi-r.1	8076612	peroxisome biogenesis protein 12
sot-r.1	102592664	peroxisome biogenesis protein 12
cit-r.1	102623127	peroxisome biogenesis protein 12
bdi-r.1	100830228	peroxisome biogenesis protein 12
nta-r.1	107790191	peroxisome biogenesis protein 12
nta-r.1	107779004	peroxisome biogenesis protein 12-like

Annotation

functional annotation

KEGG

cre04146 [list] [network] Peroxisome (43 genes)

GO BP

GO:0006513 [list] [network] protein monoubiquitination	(5 genes)	IEA
GO:0016558 [list] [network] protein import into peroxisome matrix	(9 genes)	IEA

GO CC

GO:1990429 [list] [network] peroxisomal importomer complex	(3 genes)	IEA
GO:0005778 [list] [network] peroxisomal membrane	(15 genes)	IEA

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity	(132 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(213 genes)	IEA
GO:0005515 [list] [network] protein binding	(1927 genes)	IEA

Protein

XP_042923538.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 1, plas 1, pero 1, E.R._vacu 1

(predict for XP_042923538.1)

Subcellular
localization
TargetP

other 9

(predict for XP_042923538.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g263602v5	ath-u.5 for PEX12	gma-u.5 for 100814145	gma-u.5 for 100804330	sly-u.5 for 101252586	osa-u.5 for 4348849	bra-r.6 for 103859036	bra-r.6 for 103848917	vvi-u.5 for 100257920	ppo-u.5 for 7465944	mtr-u.5 for 11421943	tae-r.2 for 123180991	tae-r.2 for 123120682	tae-r.2 for 123045054	hvu-r.1 for 123430537	ghi-r.1 for 107928763	ghi-r.1 for 107892668	bna-r.1 for 106438982	bna-r.1 for 106447632	sbi-r.1 for 8076612	sot-r.1 for 102592664	cit-r.1 for 102623127	bdi-r.1 for 100830228	nta-r.1 for 107790191	nta-r.1 for 107779004

Ortholog

Ortholog ID: 10060

Species

cre

ath

gma

sly

osa

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

PEX12

Function^*

uncharacterized protein

peroxin-12

peroxisome biogenesis protein 12

peroxisome biogenesis protein 12-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath03050	Proteasome	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2
sly00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00230	Purine metabolism	2
ppo00740	Riboflavin metabolism	2
ppo00280	Valine, leucine and isoleucine degradation	2
ppo04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2
ghi04146	Peroxisome	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	4
nta03040	Spliceosome	2
nta00270	Cysteine and methionine metabolism	2
nta00470	D-Amino acid metabolism	2
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	4
nta00270	Cysteine and methionine metabolism	2
nta00470	D-Amino acid metabolism	2
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

5721990

819602

100814145

100804330

101252586

4348849

103859036

103848917

100257920

7465944

11421943

123180991

123120682

123045054

123430537

107928763

107892668

106438982

106447632

8076612

102592664

102623127

100830228

107790191

107779004

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g263602v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g263602v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta	zma
Paralog	1	1	2	1	1	2	1	1	1	3	1	2	2	1	1	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g263602v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g263602v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**