ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g259401v5	uncharacterized protein
cre-r.1	CHLRE_03g200350v5	uncharacterized protein
gma-u.5	100788294	uncharacterized LOC100788294
gma-u.5	100786541	uncharacterized LOC100786541
gma-u.5	100786025	uncharacterized LOC100786025
sly-u.5	101245590	uncharacterized LOC101245590
osa-u.5	4348209	uncharacterized LOC4348209
zma-u.5	100284521	CMV 1a interacting protein 1
zma-u.5	103633886	demethylmenaquinone methyltransferase
vvi-u.5	100245387	uncharacterized LOC100245387
ppo-u.5	7494596	uncharacterized LOC7494596
mtr-u.5	11418346	uncharacterized LOC11418346
tae-r.2	123145402	uncharacterized LOC123145402
tae-r.2	123138146	uncharacterized LOC123138146
tae-r.2	123128293	uncharacterized LOC123128293
hvu-r.1	123406391	uncharacterized LOC123406391
ghi-r.1	107896856	uncharacterized LOC107896856
ghi-r.1	107914497	uncharacterized LOC107914497
sbi-r.1	8056857	uncharacterized LOC8056857
sot-r.1	102586362	uncharacterized LOC102586362
cit-r.1	102611255	uncharacterized LOC102611255
bdi-r.1	100842468	uncharacterized LOC100842468
nta-r.1	107793530	uncharacterized LOC107793530
nta-r.1	107768941	uncharacterized LOC107768941

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity

(132 genes)

IEA

Protein

XP_042923472.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, chlo_mito 5, mito 4

(predict for XP_042923472.1)

Subcellular
localization
TargetP

mito 6, chlo 5

(predict for XP_042923472.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g259401v5	cre-r.1 for CHLRE_03g200350v5	gma-u.5 for 100788294	gma-u.5 for 100786541	gma-u.5 for 100786025	sly-u.5 for 101245590	osa-u.5 for 4348209	zma-u.5 for 100284521	zma-u.5 for 103633886	vvi-u.5 for 100245387	ppo-u.5 for 7494596	mtr-u.5 for 11418346	tae-r.2 for 123145402	tae-r.2 for 123138146	tae-r.2 for 123128293	hvu-r.1 for 123406391	ghi-r.1 for 107896856	ghi-r.1 for 107914497	sbi-r.1 for 8056857	sot-r.1 for 102586362	cit-r.1 for 102611255	bdi-r.1 for 100842468	nta-r.1 for 107793530	nta-r.1 for 107768941

Ortholog

Ortholog ID: 10595

Species

cre

gma

sly

osa

zma

vvi

ppo

mtr

tae

hvu

ghi

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

uncharacterized LOC100788294

uncharacterized LOC100786025

uncharacterized LOC100785497

uncharacterized LOC101245590

uncharacterized LOC4348209

CMV 1a interacting protein 1

demethylmenaquinone methyltransferase

uncharacterized LOC100245387

uncharacterized LOC7494596

uncharacterized LOC11418346

uncharacterized LOC123145402

uncharacterized LOC123138146

uncharacterized LOC123128293

uncharacterized LOC123406391

uncharacterized LOC107896856

uncharacterized LOC107914497

uncharacterized LOC8056857

uncharacterized LOC102586362

uncharacterized LOC102611255

uncharacterized LOC100842468

uncharacterized LOC107793530

uncharacterized LOC107768941

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	4
cre01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	7
cre01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00196	Photosynthesis - antenna proteins	11
gma00860	Porphyrin metabolism	4
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	5
gma00860	Porphyrin metabolism	4
gma00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	4
gma00030	Pentose phosphate pathway	2
gma00040	Pentose and glucuronate interconversions	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00860	Porphyrin metabolism	6
sly00196	Photosynthesis - antenna proteins	4
sly00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	4
osa00195	Photosynthesis	4
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00710	Carbon fixation by Calvin cycle	3
zma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00710	Carbon fixation by Calvin cycle	3
zma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	3
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00710	Carbon fixation by Calvin cycle	5
mtr01200	Carbon metabolism	5
mtr00010	Glycolysis / Gluconeogenesis	3
mtr00030	Pentose phosphate pathway	3
mtr00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00860	Porphyrin metabolism	9
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae00650	Butanoate metabolism	2
tae01200	Carbon metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00860	Porphyrin metabolism	4
tae01200	Carbon metabolism	2
tae00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	3
tae00480	Glutathione metabolism	3
tae01200	Carbon metabolism	3
tae00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00196	Photosynthesis - antenna proteins	5
hvu00195	Photosynthesis	4
hvu00630	Glyoxylate and dicarboxylate metabolism	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	7
ghi00860	Porphyrin metabolism	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	7
ghi00860	Porphyrin metabolism	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	7
sot00900	Terpenoid backbone biosynthesis	2
sot00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit03013	Nucleocytoplasmic transport	2
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00195	Photosynthesis	5
nta00196	Photosynthesis - antenna proteins	4
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00195	Photosynthesis	6
nta00196	Photosynthesis - antenna proteins	4
nta00860	Porphyrin metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

5722067

5718940

100788294

100786025

100785497

101245590

4348209

100284521

103633886

100245387

7494596

11418346

123145402

123138146

123128293

123406391

107896856

107914497

8056857

102586362

102611255

100842468

107793530

107768941

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g259401v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g259401v5 (cre-r.1 coexpression data)


Species	cre	gma	sly	osa	zma	vvi	ppo	mtr	tae	hvu	ghi	sbi	sot	cit	bdi	nta	bna	bra	ath
Paralog	2	3	1	1	2	1	1	1	3	1	2	1	1	1	1	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g259401v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g259401v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**