ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g255250v5	uncharacterized protein
ath-u.5	SCI1	splicing regulatory glutamine/lysine-rich-like protein
gma-u.5	100799628	style cell-cycle inhibitor 1-A
gma-u.5	100795206	style cell-cycle inhibitor 1-B
sly-u.5	101266939	style cell-cycle inhibitor 1-B
osa-u.5	4328442	style cell-cycle inhibitor 1-A
zma-u.5	100281976	splicing factor, arginine/serine-rich 12
ppo-u.5	7492096	style cell-cycle inhibitor 1-A-like
ppo-u.5	7462559	style cell-cycle inhibitor 1-A
mtr-u.5	25480526	style cell-cycle inhibitor 1
tae-r.2	123136659	style cell-cycle inhibitor 1-A
tae-r.2	123132622	style cell-cycle inhibitor 1-A
hvu-r.1	123401105	style cell-cycle inhibitor 1-A
ghi-r.1	107919885	style cell-cycle inhibitor 1-A
ghi-r.1	107895132	style cell-cycle inhibitor 1-A
bna-r.1	106354770	style cell-cycle inhibitor 1
bna-r.1	111213102	style cell-cycle inhibitor 1
sbi-r.1	8077177	TRAF3-interacting protein 1
sot-r.1	102593646	protein PXR1
bdi-r.1	100833582	uncharacterized LOC100833582
nta-r.1	107802286	protein pxr1-like
nta-r.1	SCI1B	Style cell-cycle inhibitor 1-B

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042923392.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_042923392.1)

Subcellular
localization
TargetP

other 9

(predict for XP_042923392.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g255250v5	ath-u.5 for SCI1	gma-u.5 for 100799628	gma-u.5 for 100795206	sly-u.5 for 101266939	osa-u.5 for 4328442	zma-u.5 for 100281976	ppo-u.5 for 7492096	ppo-u.5 for 7462559	mtr-u.5 for 25480526	tae-r.2 for 123136659	tae-r.2 for 123132622	hvu-r.1 for 123401105	ghi-r.1 for 107919885	ghi-r.1 for 107895132	bna-r.1 for 106354770	bna-r.1 for 111213102	sbi-r.1 for 8077177	sot-r.1 for 102593646	bdi-r.1 for 100833582	nta-r.1 for 107802286	nta-r.1 for SCI1B

Ortholog

Ortholog ID: 11530

Species

cre

ath

gma

sly

osa

zma

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

bdi

nta

Symbol

SCI1

SCI1B

Function^*

uncharacterized protein

splicing regulatory glutamine/lysine-rich-like protein

style cell-cycle inhibitor 1-A

style cell-cycle inhibitor 1-B

style cell-cycle inhibitor 1-A

splicing factor, arginine/serine-rich 12

style cell-cycle inhibitor 1-A-like

style cell-cycle inhibitor 1-A

style cell-cycle inhibitor 1

style cell-cycle inhibitor 1-A

style cell-cycle inhibitor 1

TRAF3-interacting protein 1

protein PXR1

uncharacterized LOC100833582

protein pxr1-like

Style cell-cycle inhibitor 1-B

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	3
gma03040	Spliceosome	3
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4
sly03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03020	RNA polymerase	3
osa03010	Ribosome	3
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4
zma00190	Oxidative phosphorylation	2
zma00230	Purine metabolism	2
zma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03420	Nucleotide excision repair	4
ppo03020	RNA polymerase	3
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	6
ppo03020	RNA polymerase	2
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00260	Glycine, serine and threonine metabolism	3
tae00630	Glyoxylate and dicarboxylate metabolism	3
tae00670	One carbon pool by folate	3
tae00785	Lipoic acid metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	4
tae03420	Nucleotide excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna03013	Nucleocytoplasmic transport	4
bna03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	6
bna03050	Proteasome	2
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta03040	Spliceosome	3
nta04148	Efferocytosis	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

5722133

844261

100799628

100795206

101266939

4328442

100281976

7492096

7462559

25480526

123136659

123132622

123401105

107919885

107895132

106354770

111213102

8077177

102593646

100833582

107802286

107767402

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g255250v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g255250v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	bdi	nta	vvi	bra	cit
Paralog	1	1	2	1	1	1	2	1	2	1	2	2	1	1	1	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g255250v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g255250v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**