ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_09g409350v5	uncharacterized protein
ath-u.5	ABCE1	RNAse l inhibitor protein 1
ath-u.5	ABCE2	RNAse l inhibitor protein 2
gma-u.5	100797423	ABC transporter E family member 2
sly-u.5	ABCE1	ABC transporter E family member 1
sly-u.5	ABCE2	ABC transporter E family member 2
osa-u.5	4329031	ABC transporter E family member 2
osa-u.5	4350692	ABC transporter E family member 2
zma-u.5	103639168	ABC transporter E family member 2
zma-u.5	103634615	ABC transporter E family member 2
bra-r.6	103834115	ABC transporter E family member 2
bra-r.6	103857266	ABC transporter E family member 2
vvi-u.5	100249488	ABC transporter E family member 2
ppo-u.5	18098429	ABC transporter E family member 2
ppo-u.5	7475669	ABC transporter E family member 2
mtr-u.5	25482205	ABC transporter E family member 2
mtr-u.5	25491223	ABC transporter E family member 2
mtr-u.5	11418591	ABC transporter E family member 2
tae-r.2	123128424	ABC transporter E family member 2
tae-r.2	123092066	ABC transporter E family member 2
tae-r.2	123047471	ABC transporter E family member 2
hvu-r.1	123448513	ABC transporter E family member 2
hvu-r.1	123439324	ABC transporter E family member 2-like
hvu-r.1	123428461	ABC transporter E family member 2-like
ghi-r.1	107929447	ABC transporter E family member 2
ghi-r.1	107900690	ABC transporter E family member 2
bna-r.1	125600413	ABC transporter E family member 2-like
bna-r.1	111214266	ABC transporter E family member 2-like
bna-r.1	125601696	ABC transporter E family member 2-like
sbi-r.1	8056853	ABC transporter E family member 2
sbi-r.1	8060395	ABC transporter E family member 2
sot-r.1	102606149	ABC transporter E family member 2
sot-r.1	102595871	ABC transporter E family member 2
cit-r.1	102614068	ABC transporter E family member 2
bdi-r.1	100845745	ABC transporter E family member 2-like
bdi-r.1	100832346	ABC transporter E family member 2
bdi-r.1	100829978	ABC transporter E family member 2
nta-r.1	107793476	ABC transporter E family member 2
nta-r.1	107819992	ABC transporter E family member 2

Top 50 coexpressed genes to CHLRE_09g409350v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_09g409350v5 (cre-r.1 coexpression data)

CoexMap"5722258"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006415 [list] [network] translational termination	(7 genes)	IEA
GO:0000054 [list] [network] ribosomal subunit export from nucleus	(11 genes)	IEA
GO:0006413 [list] [network] translational initiation	(30 genes)	IEA

GO CC

GO MF

GO:0043024 [list] [network] ribosomal small subunit binding	(5 genes)	IEA
GO:0005506 [list] [network] iron ion binding	(109 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(290 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1223 genes)	IEA

Protein

XP_042921534.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, nucl 1, chlo 1, cysk 1, nucl_plas 1

(predict for XP_042921534.1)

Subcellular
localization
TargetP

other 9

(predict for XP_042921534.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_09g409350v5	ath-u.5 for ABCE1	ath-u.5 for ABCE2	gma-u.5 for 100797423	sly-u.5 for ABCE1	sly-u.5 for ABCE2	osa-u.5 for 4329031	osa-u.5 for 4350692	zma-u.5 for 103639168	zma-u.5 for 103634615	bra-r.6 for 103834115	bra-r.6 for 103857266	vvi-u.5 for 100249488	ppo-u.5 for 18098429	ppo-u.5 for 7475669	mtr-u.5 for 25482205	mtr-u.5 for 25491223	mtr-u.5 for 11418591	tae-r.2 for 123128424	tae-r.2 for 123092066	tae-r.2 for 123047471	hvu-r.1 for 123448513	hvu-r.1 for 123439324	hvu-r.1 for 123428461	ghi-r.1 for 107929447	ghi-r.1 for 107900690	bna-r.1 for 125600413	bna-r.1 for 111214266	bna-r.1 for 125601696	sbi-r.1 for 8056853	sbi-r.1 for 8060395	sot-r.1 for 102606149	sot-r.1 for 102595871	cit-r.1 for 102614068	bdi-r.1 for 100845745	bdi-r.1 for 100832346	bdi-r.1 for 100829978	nta-r.1 for 107793476	nta-r.1 for 107819992

Ortholog

Ortholog ID: 2635

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_09g409350v5

ABCE1

ABCE2

LOC100797423

ABCE1

ABCE2

Function^*

uncharacterized protein

RNAse l inhibitor protein 1

RNAse l inhibitor protein 2

ABC transporter E family member 2

ABC transporter E family member 1

ABC transporter E family member 2

ABC transporter E family member 2-like

ABC transporter E family member 2

ABC transporter E family member 1

ABC transporter E family member 1-like

ABC transporter E family member 2

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00970	Aminoacyl-tRNA biosynthesis	3
cre03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03460	Fanconi anemia pathway	2
ath03440	Homologous recombination	2
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	3
ath03015	mRNA surveillance pathway	3
ath03013	Nucleocytoplasmic transport	2
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	5
gma03013	Nucleocytoplasmic transport	4
gma03050	Proteasome	2
gma00230	Purine metabolism	2
gma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	5
sly03015	mRNA surveillance pathway	5
sly03040	Spliceosome	3
sly03010	Ribosome	3
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3
sly03050	Proteasome	3
sly03060	Protein export	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3
osa04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	4
zma03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	5
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	3
mtr00020	Citrate cycle (TCA cycle)	2
mtr00785	Lipoic acid metabolism	2
mtr01200	Carbon metabolism	2
mtr01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	3
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	3
mtr04141	Protein processing in endoplasmic reticulum	2
mtr00230	Purine metabolism	2
mtr00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00541	Biosynthesis of various nucleotide sugars	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00860	Porphyrin metabolism	5
tae00970	Aminoacyl-tRNA biosynthesis	5
tae01240	Biosynthesis of cofactors	5
tae03015	mRNA surveillance pathway	4
tae00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03015	mRNA surveillance pathway	2
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi03083	Polycomb repressive complex	3
ghi04712	Circadian rhythm - plant	3
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	5
sbi00020	Citrate cycle (TCA cycle)	5
sbi01200	Carbon metabolism	5
sbi00785	Lipoic acid metabolism	3
sbi01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00350	Tyrosine metabolism	2
sbi00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	3
sot00970	Aminoacyl-tRNA biosynthesis	2
sot00260	Glycine, serine and threonine metabolism	2
sot00460	Cyanoamino acid metabolism	2
sot00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2
cit00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	4
bdi00020	Citrate cycle (TCA cycle)	3
bdi01200	Carbon metabolism	3
bdi01210	2-Oxocarboxylic acid metabolism	3
bdi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	4
bdi00020	Citrate cycle (TCA cycle)	3
bdi01200	Carbon metabolism	3
bdi01210	2-Oxocarboxylic acid metabolism	3
bdi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5
nta03060	Protein export	2
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5
nta03060	Protein export	2
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

5722258

820568

827661

100797423

101250421

101254120

4329031

4350692

103639168

103634615

103834115

103861041

100249488

18098429

7475669

25482205

25491223

11418591

123047471

123097355

123191098

123448513

123439324

123428461

107929447

107900690

106401318

106347587

106395932

8056853

8060395

102606149

102595871

102614068

100829978

100823890

100822584

107793476

107819992

The preparation time of this page was 0.2 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	2	1	2	2	2	2	1	2	3	3	3	2	3	2	2	1	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_09g409350v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_09g409350v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**