ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_12g522600v5	uncharacterized protein
ath-u.5	CYTC-2	cytochrome c-2
ath-u.5	CYTC-1	CYTOCHROME C-1
gma-u.5	100817799	cytochrome c
gma-u.5	100500015	uncharacterized LOC100500015
gma-u.5	100305937	uncharacterized LOC100305937
sly-u.5	101261271	cytochrome c
sly-u.5	101264887	cytochrome c
osa-u.5	4324880	cytochrome c
osa-u.5	4338825	cytochrome c-like
zma-u.5	100277932	cytochrome c
zma-u.5	100501351	cytochrome c-like
bra-r.6	103858550	cytochrome c-2
bra-r.6	103840824	cytochrome c
bra-r.6	103829307	cytochrome c
vvi-u.5	100266092	cytochrome c
vvi-u.5	100243029	mitochondrial cytochrome c
ppo-u.5	112323893	cytochrome c
ppo-u.5	7475768	cytochrome c
mtr-u.5	11436188	cytochrome c
mtr-u.5	25498920	cytochrome c
mtr-u.5	25498919	cytochrome c-2
tae-r.2	123056447	cytochrome c
hvu-r.1	123442708	cytochrome c
ghi-r.1	107914024	cytochrome c
ghi-r.1	107957634	cytochrome c
ghi-r.1	107938515	cytochrome c
bna-r.1	106423443	cytochrome c-2
bna-r.1	106429774	cytochrome c-like
bna-r.1	106436435	cytochrome c-2
sbi-r.1	8076974	cytochrome c
sbi-r.1	8061477	cytochrome c
sot-r.1	102582196	cytochrome c-like
cit-r.1	102617830	cytochrome c-2-like
cit-r.1	102618527	cytochrome c
bdi-r.1	100826967	cytochrome c
nta-r.1	107777542	cytochrome c
nta-r.1	107789084	cytochrome c
nta-r.1	107808274	cytochrome c-like

Top 50 coexpressed genes to CHLRE_12g522600v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_12g522600v5 (cre-r.1 coexpression data)

CoexMap"5722552"

[Cytoscape]

Annotation

functional annotation

KEGG

cre00190 [list] [network] Oxidative phosphorylation (84 genes)

GO BP

GO:0006123 [list] [network] mitochondrial electron transport, cytochrome c to oxygen	(3 genes)	IEA
GO:0006122 [list] [network] mitochondrial electron transport, ubiquinol to cytochrome c	(6 genes)	IEA

GO CC

GO:0005758 [list] [network] mitochondrial intermembrane space

(4 genes)

IEA

GO MF

GO:0009055 [list] [network] electron transfer activity	(38 genes)	IEA
GO:0020037 [list] [network] heme binding	(88 genes)	IEA

Protein

XP_001696912.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 10

(predict for XP_001696912.1)

Subcellular
localization
TargetP

other 8

(predict for XP_001696912.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_12g522600v5	ath-u.5 for CYTC-2	ath-u.5 for CYTC-1	gma-u.5 for 100817799	gma-u.5 for 100500015	gma-u.5 for 100305937	sly-u.5 for 101261271	sly-u.5 for 101264887	osa-u.5 for 4324880	osa-u.5 for 4338825	zma-u.5 for 100277932	zma-u.5 for 100501351	bra-r.6 for 103858550	bra-r.6 for 103840824	bra-r.6 for 103829307	vvi-u.5 for 100266092	vvi-u.5 for 100243029	ppo-u.5 for 112323893	ppo-u.5 for 7475768	mtr-u.5 for 11436188	mtr-u.5 for 25498920	mtr-u.5 for 25498919	tae-r.2 for 123056447	hvu-r.1 for 123442708	ghi-r.1 for 107914024	ghi-r.1 for 107957634	ghi-r.1 for 107938515	bna-r.1 for 106423443	bna-r.1 for 106429774	bna-r.1 for 106436435	sbi-r.1 for 8076974	sbi-r.1 for 8061477	sot-r.1 for 102582196	cit-r.1 for 102617830	cit-r.1 for 102618527	bdi-r.1 for 100826967	nta-r.1 for 107777542	nta-r.1 for 107789084	nta-r.1 for 107808274

Ortholog

Ortholog ID: 2091

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_12g522600v5

CYTC-2

CYTC-1

Function^*

uncharacterized protein

cytochrome c-2

CYTOCHROME C-1

cytochrome c

uncharacterized LOC100500015

uncharacterized LOC100305937

cytochrome c

cytochrome c-like

cytochrome c

cytochrome c-like

cytochrome c-2

cytochrome c

mitochondrial cytochrome c

cytochrome c

cytochrome c-2

cytochrome c

cytochrome c-like

cytochrome c

cytochrome c-like

cytochrome c-2

cytochrome c

cytochrome c-like

cytochrome c-2-like

cytochrome c

cytochrome c-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	3
cre03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	8
ath00020	Citrate cycle (TCA cycle)	3
ath01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3
gma04148	Efferocytosis	3
gma04141	Protein processing in endoplasmic reticulum	3
gma04144	Endocytosis	3
gma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	8
gma01240	Biosynthesis of cofactors	3
gma00740	Riboflavin metabolism	2
gma04144	Endocytosis	2
gma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	6
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	7
osa00020	Citrate cycle (TCA cycle)	6
osa01210	2-Oxocarboxylic acid metabolism	4
osa01230	Biosynthesis of amino acids	4
osa00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4
zma00020	Citrate cycle (TCA cycle)	2
zma00270	Cysteine and methionine metabolism	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	9
zma04142	Lysosome	2
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3
bra01200	Carbon metabolism	3
bra00020	Citrate cycle (TCA cycle)	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	9
bra00020	Citrate cycle (TCA cycle)	4
bra01200	Carbon metabolism	4
bra01210	2-Oxocarboxylic acid metabolism	4
bra00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	10
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	5
vvi03018	RNA degradation	3
vvi00020	Citrate cycle (TCA cycle)	3
vvi01200	Carbon metabolism	3
vvi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	5
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	6
ppo03010	Ribosome	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	8
mtr00020	Citrate cycle (TCA cycle)	2
mtr00640	Propanoate metabolism	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	11
mtr00020	Citrate cycle (TCA cycle)	2
mtr00640	Propanoate metabolism	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	4
tae00051	Fructose and mannose metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00020	Citrate cycle (TCA cycle)	5
tae01200	Carbon metabolism	5
tae01210	2-Oxocarboxylic acid metabolism	5
tae00630	Glyoxylate and dicarboxylate metabolism	4
tae01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	5
hvu01200	Carbon metabolism	4
hvu00010	Glycolysis / Gluconeogenesis	3
hvu00710	Carbon fixation by Calvin cycle	3
hvu01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	5
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00380	Tryptophan metabolism	3
ghi00966	Glucosinolate biosynthesis	3
ghi01210	2-Oxocarboxylic acid metabolism	3
ghi00190	Oxidative phosphorylation	2
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi04626	Plant-pathogen interaction	4
ghi00020	Citrate cycle (TCA cycle)	2
ghi00480	Glutathione metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00330	Arginine and proline metabolism	7
bna00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00020	Citrate cycle (TCA cycle)	2
sbi01200	Carbon metabolism	2
sbi01240	Biosynthesis of cofactors	2
sbi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	3
sbi00020	Citrate cycle (TCA cycle)	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03013	Nucleocytoplasmic transport	4
sot00480	Glutathione metabolism	3
sot03250	Viral life cycle - HIV-1	3
sot00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00020	Citrate cycle (TCA cycle)	4
nta00310	Lysine degradation	4
nta00380	Tryptophan metabolism	4
nta00785	Lipoic acid metabolism	4
nta01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3
nta04141	Protein processing in endoplasmic reticulum	3
nta00750	Vitamin B6 metabolism	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

5722552

826595

838889

100817799

100500015

100305937

101261271

101264887

4324880

4338825

100277932

100501351

103858550

103840824

103829307

100266092

100243029

112323893

7475768

11436188

25498920

25498919

123056447

123075160

123133728

123442708

107914024

107904786

107898679

106429774

106436435

106411021

8076974

8061477

102582196

102617830

102618527

100826967

107777542

107789084

107808274

The preparation time of this page was 0.3 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	2	3	2	2	2	3	2	2	3	1	1	3	3	2	1	2	1	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_12g522600v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_12g522600v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**