ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_17g721000v5	uncharacterized protein
cre-r.1	CHLRE_14g618400v5	uncharacterized protein
ath-u.5	ABCA10	ABC2 homolog 14
gma-u.5	100792897	ABC transporter A family member 7
gma-u.5	100805474	ABC transporter A family member 7-like
gma-u.5	100806425	ABC transporter A family member 7
sly-u.5	ABCA4	ABC transporter A family member 4
sly-u.5	ABCA2	ABC transporter A family member 2
osa-u.5	9269712	ABC transporter A family member 7
osa-u.5	4328702	ABC transporter A family member 8
osa-u.5	4341405	ABC transporter A family member 8
zma-u.5	100273600	uncharacterized LOC100273600
zma-u.5	103632635	ABC transporter A family member 7
zma-u.5	103653413	ABC transporter A family member 7
bra-r.6	103874043	ABC transporter A family member 7
vvi-u.5	100253652	ABC transporter A family member 7
ppo-u.5	7483440	ABC transporter A family member 7
ppo-u.5	18105802	ABC transporter A family member 7-like
mtr-u.5	11440206	ABC transporter A family member 7
mtr-u.5	25490494	ABC transporter A family member 7
mtr-u.5	25493811	ABC transporter A family member 7
tae-r.2	123103584	ABC transporter A family member 7
tae-r.2	123111774	ABC transporter A family member 7
hvu-r.1	123447501	ABC transporter A family member 7-like
hvu-r.1	123446787	ABC transporter A family member 7-like
ghi-r.1	107940004	ABC transporter A family member 7
ghi-r.1	107946504	ABC transporter A family member 7
bna-r.1	106347602	ABC transporter A family member 7
bna-r.1	111207083	ABC transporter A family member 7-like
sbi-r.1	8054613	ABC transporter A family member 7
sot-r.1	102584368	ABC transporter A family member 7-like
sot-r.1	102584711	ABC transporter A family member 7-like
sot-r.1	102587948	ABC transporter A family member 7-like
cit-r.1	102626794	ABC transporter A family member 7-like
bdi-r.1	100846844	ABC transporter A family member 7
bdi-r.1	100841745	ABC transporter A family member 7
nta-r.1	107788084	ABC transporter A family member 7-like
nta-r.1	107797166	ABC transporter A family member 7
nta-r.1	107793820	ABC transporter A family member 7

Top 50 coexpressed genes to CHLRE_17g721000v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_17g721000v5 (cre-r.1 coexpression data)

CoexMap"5722689"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006869 [list] [network] lipid transport	(24 genes)	IEA
GO:0055085 [list] [network] transmembrane transport	(461 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane	(1543 genes)	IEA
GO:0043231 [list] [network] intracellular membrane-bounded organelle	(3013 genes)	IEA

GO MF

GO:0005319 [list] [network] lipid transporter activity	(22 genes)	IEA
GO:0140359 [list] [network] ABC-type transporter activity	(65 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(290 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1223 genes)	IEA

Protein

XP_042914718.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 1, chlo 1, mito 1, pero 1, chlo_mito 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_042914718.1)

Subcellular
localization
TargetP

mito 7

(predict for XP_042914718.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_17g721000v5	cre-r.1 for CHLRE_14g618400v5	ath-u.5 for ABCA10	gma-u.5 for 100792897	gma-u.5 for 100805474	gma-u.5 for 100806425	sly-u.5 for ABCA4	sly-u.5 for ABCA2	osa-u.5 for 9269712	osa-u.5 for 4328702	osa-u.5 for 4341405	zma-u.5 for 100273600	zma-u.5 for 103632635	zma-u.5 for 103653413	bra-r.6 for 103874043	vvi-u.5 for 100253652	ppo-u.5 for 7483440	ppo-u.5 for 18105802	mtr-u.5 for 11440206	mtr-u.5 for 25490494	mtr-u.5 for 25493811	tae-r.2 for 123103584	tae-r.2 for 123111774	hvu-r.1 for 123447501	hvu-r.1 for 123446787	ghi-r.1 for 107940004	ghi-r.1 for 107946504	bna-r.1 for 106347602	bna-r.1 for 111207083	sbi-r.1 for 8054613	sot-r.1 for 102584368	sot-r.1 for 102584711	sot-r.1 for 102587948	cit-r.1 for 102626794	bdi-r.1 for 100846844	bdi-r.1 for 100841745	nta-r.1 for 107788084	nta-r.1 for 107797166	nta-r.1 for 107793820

Ortholog

Ortholog ID: 844

Species

cre

ath

gma

sly

osa

zma

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

ABCA4

ABCA4

ABCA2

ABCA3

Function^*

uncharacterized protein

ATP binding cassette subfamily A4