ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_17g725350v5	uncharacterized protein
ath-u.5	PSL4	calmodulin-binding protein
gma-u.5	100811132	glucosidase 2 subunit beta
gma-u.5	100807083	glucosidase 2 subunit beta
sly-u.5	101257751	glucosidase 2 subunit beta
osa-u.5	4324264	glucosidase 2 subunit beta-like
zma-u.5	100279808	uncharacterized LOC100279808
zma-u.5	100279534	uncharacterized LOC100279534
bra-r.6	103856932	glucosidase 2 subunit beta
bra-r.6	103845078	glucosidase 2 subunit beta
vvi-u.5	100255312	glucosidase 2 subunit beta
ppo-u.5	7463563	glucosidase 2 subunit beta
ppo-u.5	7482359	glucosidase 2 subunit beta
ppo-u.5	7457685	glucosidase 2 subunit beta
mtr-u.5	11441385	glucosidase 2 subunit beta
tae-r.2	123078181	glucosidase 2 subunit beta
tae-r.2	123069696	glucosidase 2 subunit beta
tae-r.2	123061109	glucosidase 2 subunit beta
hvu-r.1	123443525	glucosidase 2 subunit beta
ghi-r.1	107894335	glucosidase 2 subunit beta
ghi-r.1	121204857	glucosidase 2 subunit beta
ghi-r.1	107942806	glucosidase 2 subunit beta
bna-r.1	106406603	glucosidase 2 subunit beta
bna-r.1	106387437	glucosidase 2 subunit beta
bna-r.1	106437659	glucosidase 2 subunit beta-like
sbi-r.1	110433931	glucosidase 2 subunit beta
sot-r.1	102601829	glucosidase 2 subunit beta
cit-r.1	102627402	glucosidase 2 subunit beta
bdi-r.1	100826220	glucosidase 2 subunit beta
nta-r.1	107771368	glucosidase 2 subunit beta
nta-r.1	107787199	glucosidase 2 subunit beta
nta-r.1	107808091	glucosidase 2 subunit beta

Top 50 coexpressed genes to CHLRE_17g725350v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_17g725350v5 (cre-r.1 coexpression data)

CoexMap"5722768"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006491 [list] [network] N-glycan processing

(3 genes)

IEA

GO CC

GO:0017177 [list] [network] glucosidase II complex

(1 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(1927 genes)

IEA

Protein

XP_001697152.2 [sequence] [blastp]
XP_042914791.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 5, extr 4	(predict for XP_001697152.2)
vacu 4, extr 2, E.R._vacu 2, nucl 1, golg 1	(predict for XP_042914791.1)

Subcellular
localization
TargetP

scret 8	(predict for XP_001697152.2)
scret 8	(predict for XP_042914791.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_17g725350v5	ath-u.5 for PSL4	gma-u.5 for 100811132	gma-u.5 for 100807083	sly-u.5 for 101257751	osa-u.5 for 4324264	zma-u.5 for 100279808	zma-u.5 for 100279534	bra-r.6 for 103856932	bra-r.6 for 103845078	vvi-u.5 for 100255312	ppo-u.5 for 7463563	ppo-u.5 for 7482359	ppo-u.5 for 7457685	mtr-u.5 for 11441385	tae-r.2 for 123078181	tae-r.2 for 123069696	tae-r.2 for 123061109	hvu-r.1 for 123443525	ghi-r.1 for 107894335	ghi-r.1 for 121204857	ghi-r.1 for 107942806	bna-r.1 for 106406603	bna-r.1 for 106387437	bna-r.1 for 106437659	sbi-r.1 for 110433931	sot-r.1 for 102601829	cit-r.1 for 102627402	bdi-r.1 for 100826220	nta-r.1 for 107771368	nta-r.1 for 107787199	nta-r.1 for 107808091

Ortholog

Ortholog ID: 5865

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

PSL4

Function^*

uncharacterized protein

calmodulin-binding protein

glucosidase 2 subunit beta

glucosidase 2 subunit beta-like

uncharacterized LOC100279808

uncharacterized LOC100279534

glucosidase 2 subunit beta

glucosidase 2 subunit beta-like

glucosidase 2 subunit beta

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	3
cre03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	8
ath00510	N-Glycan biosynthesis	5
ath00513	Various types of N-glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	5
osa00510	N-Glycan biosynthesis	4
osa00513	Various types of N-glycan biosynthesis	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	7
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	4
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	8
mtr00510	N-Glycan biosynthesis	6
mtr00513	Various types of N-glycan biosynthesis	6
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2
hvu03018	RNA degradation	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	3
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	9
bna03060	Protein export	3
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	8
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	8
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4
nta00510	N-Glycan biosynthesis	2
nta03083	Polycomb repressive complex	2
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4
nta00510	N-Glycan biosynthesis	2
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2
nta00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4
nta03083	Polycomb repressive complex	3
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2
nta00053	Ascorbate and aldarate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

5722768

835736

100811132

100807083

101257751

4324264

100279808

100279534

103856932

103845078

100255312

7463563

7482359

7457685

11441385

123078181

123069696

123061109

123443525

107894335

107926288

107894326

106406603

106437659

106451886

110433931

102601829

102627402

100826220

107787199

107808091

107811503

The preparation time of this page was 0.1 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	2	2	1	3	1	3	1	3	3	1	1	1	1	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_17g725350v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_17g725350v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**