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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_11g477250v5   uncharacterized protein 
 ath-u.5   AT3G62140   NEFA-interacting nuclear protein 
 gma-u.5   100803069   PSME3-interacting protein 
 gma-u.5   100780978   PSME3-interacting protein 
 sly-u.5   101259480   uncharacterized LOC101259480 
 osa-u.5   4326989   uncharacterized LOC4326989 
 bra-r.6   103842041   PSME3-interacting protein 
 bra-r.6   103830346   PSME3-interacting protein 
 vvi-u.5   100265766   uncharacterized LOC100265766 
 ppo-u.5   7455391   uncharacterized LOC7455391 
 mtr-u.5   11435294   PSME3-interacting protein 
 tae-r.2   123060424   PSME3-interacting protein 
 tae-r.2   123068965   PSME3-interacting protein 
 tae-r.2   123077493   PSME3-interacting protein 
 hvu-r.1   123442949   PSME3-interacting protein 
 ghi-r.1   107916832   PSME3-interacting protein 
 ghi-r.1   121204905   PSME3-interacting protein 
 ghi-r.1   107940778   calmodulin 
 bna-r.1   106365114   PSME3-interacting protein 
 sbi-r.1   8081536   protein FAM192A 
 sot-r.1   102586947   uncharacterized LOC102586947 
 cit-r.1   102627729   uncharacterized LOC102627729 
 bdi-r.1   100842543   protein FAM192A 
 nta-r.1   107815243   uncharacterized LOC107815243 
 nta-r.1   107762256   uncharacterized LOC107762256 

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Top 50 coexpressed genes to CHLRE_11g477250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_11g477250v5 (cre-r.1 coexpression data)

CoexMap"5722869"


creCHLRE_11g477250v5 | Entrez gene ID : 5722869    
Species cre ath gma sly osa bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta zma
Paralog 1 1 2 1 1 2 1 1 1 3 1 3 1 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042919655.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  nucl_plas 3  (predict for XP_042919655.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_042919655.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_11g477250v5
ath-u.5
for
AT3G62140
gma-u.5
for
100803069
gma-u.5
for
100780978
sly-u.5
for
101259480
osa-u.5
for
4326989
bra-r.6
for
103842041
bra-r.6
for
103830346
vvi-u.5
for
100265766
ppo-u.5
for
7455391
mtr-u.5
for
11435294
tae-r.2
for
123060424
tae-r.2
for
123068965
tae-r.2
for
123077493
hvu-r.1
for
123442949
ghi-r.1
for
107916832
ghi-r.1
for
121204905
ghi-r.1
for
107940778
bna-r.1
for
106365114
sbi-r.1
for
8081536
sot-r.1
for
102586947
cit-r.1
for
102627729
bdi-r.1
for
100842543
nta-r.1
for
107815243
nta-r.1
for
107762256


Ortholog ID: 7635
Species cre ath gma gma sly osa bra bra vvi ppo mtr tae tae tae hvu ghi ghi ghi bna sbi sot cit bdi nta nta
Symbol CHLRE_11g477250v5 AT3G62140 LOC100803069 LOC100780978 LOC101259480 LOC4326989 LOC103842041 LOC103830346 LOC100265766 LOC7455391 LOC11435294 LOC123060424 LOC123068965 LOC123077493 LOC123442949 LOC107916832 LOC121204905 LOC107940778 LOC106452005 LOC8081536 LOC102586947 LOC102627729 LOC100842543 LOC107815243 LOC107762256
Function* uncharacterized protein NEFA-interacting nuclear protein PSME3-interacting protein PSME3-interacting protein uncharacterized LOC101259480 uncharacterized LOC4326989 PSME3-interacting protein PSME3-interacting protein uncharacterized LOC100265766 uncharacterized LOC7455391 PSME3-interacting protein PSME3-interacting protein PSME3-interacting protein PSME3-interacting protein PSME3-interacting protein PSME3-interacting protein PSME3-interacting protein calmodulin PSME3-interacting protein-like protein FAM192A uncharacterized LOC102586947 uncharacterized LOC102627729 protein FAM192A uncharacterized LOC107815243 uncharacterized LOC107762256
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04120 Ubiquitin mediated proteolysis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03050 Proteasome 6
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi03040 Spliceosome 4
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04016 MAPK signaling pathway - plant 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03022 Basal transcription factors 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5722869 825387 100803069 100780978 101259480 4326989 103842041 103830346 100265766 7455391 11435294 123060424 123068965 123077493 123442949 107916832 121204905 107940778 106452005 8081536 102586947 102627729 100842543 107815243 107762256
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