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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_11g479850v5   uncharacterized protein 
 ath-u.5   CYP59   cyclophilin 59 
 gma-u.5   CYP56   peptidyl-prolyl cis-trans isomerase CYP56 
 gma-u.5   CYP59   peptidyl-prolyl cis-trans isomerase CYP59 
 sly-u.5   101259174   peptidyl-prolyl cis-trans isomerase CYP59 
 osa-u.5   107275963   peptidyl-prolyl cis-trans isomerase CYP59 
 osa-u.5   4341804   peptidyl-prolyl cis-trans isomerase CYP59 
 zma-u.5   100216940   peptidyl-prolyl cis-trans isomerase CYP59 
 bra-r.6   103832541   peptidyl-prolyl cis-trans isomerase CYP59 
 vvi-u.5   100266806   peptidyl-prolyl cis-trans isomerase CYP59 
 ppo-u.5   7492108   peptidyl-prolyl cis-trans isomerase CYP59 
 mtr-u.5   25502342   peptidyl-prolyl cis-trans isomerase CYP59 
 mtr-u.5   11433733   peptidyl-prolyl cis-trans isomerase CYP59 
 tae-r.2   123085141   peptidyl-prolyl cis-trans isomerase CYP59 
 tae-r.2   123149138   peptidyl-prolyl cis-trans isomerase CYP59 
 hvu-r.1   123409258   peptidyl-prolyl cis-trans isomerase CYP59-like 
 ghi-r.1   107907362   peptidyl-prolyl cis-trans isomerase CYP59 
 ghi-r.1   107907507   peptidyl-prolyl cis-trans isomerase CYP59 
 bna-r.1   106354110   peptidyl-prolyl cis-trans isomerase CYP59-like 
 bna-r.1   106429083   peptidyl-prolyl cis-trans isomerase CYP59-like 
 sbi-r.1   8061594   peptidyl-prolyl cis-trans isomerase CYP59 
 sot-r.1   102582851   peptidyl-prolyl cis-trans isomerase CYP59 
 sot-r.1   102583150   peptidyl-prolyl cis-trans isomerase CYP59-like 
 sot-r.1   102583525   peptidyl-prolyl cis-trans isomerase CYP59-like 
 cit-r.1   102620553   peptidyl-prolyl cis-trans isomerase CYP59 
 bdi-r.1   100838874   peptidyl-prolyl cis-trans isomerase CYP59 
 bdi-r.1   100827878   peptidyl-prolyl cis-trans isomerase CYP59 
 nta-r.1   107831678   peptidyl-prolyl cis-trans isomerase CYP59-like 
 nta-r.1   107782644   peptidyl-prolyl cis-trans isomerase CYP59 

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Top 50 coexpressed genes to CHLRE_11g479850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_11g479850v5 (cre-r.1 coexpression data)

CoexMap"5722918"


creCHLRE_11g479850v5 | Entrez gene ID : 5722918      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 2 1 1 1 1 2 2 1 2 2 1 3 1 2 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (33 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (57 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042919714.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for XP_042919714.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042919714.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_11g479850v5
ath-u.5
for
CYP59
gma-u.5
for
CYP56
gma-u.5
for
CYP59
sly-u.5
for
101259174
osa-u.5
for
107275963
osa-u.5
for
4341804
zma-u.5
for
100216940
bra-r.6
for
103832541
vvi-u.5
for
100266806
ppo-u.5
for
7492108
mtr-u.5
for
25502342
mtr-u.5
for
11433733
tae-r.2
for
123085141
tae-r.2
for
123149138
hvu-r.1
for
123409258
ghi-r.1
for
107907362
ghi-r.1
for
107907507
bna-r.1
for
106354110
bna-r.1
for
106429083
sbi-r.1
for
8061594
sot-r.1
for
102582851
sot-r.1
for
102583150
sot-r.1
for
102583525
cit-r.1
for
102620553
bdi-r.1
for
100838874
bdi-r.1
for
100827878
nta-r.1
for
107831678
nta-r.1
for
107782644


Ortholog ID: 5632
Species cre ath gma gma sly osa osa zma bra vvi ppo mtr mtr tae tae tae hvu ghi ghi bna bna sbi sot sot sot cit bdi bdi nta nta
Symbol CHLRE_11g479850v5 CYP59 CYP56 CYP59 LOC101259174 LOC107275963 LOC4341804 LOC100216940 LOC103832541 LOC100266806 LOC7492108 LOC25502342 LOC11433733 LOC123085141 LOC123149138 LOC123165763 LOC123409258 LOC107907362 LOC107907507 LOC106354110 LOC106429083 LOC8061594 LOC102582851 LOC102583150 LOC102583525 LOC102620553 LOC100838874 LOC100827878 LOC107831678 LOC107782644
Function* uncharacterized protein cyclophilin 59 peptidyl-prolyl cis-trans isomerase CYP56 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59-like peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59-like peptidyl-prolyl cis-trans isomerase CYP59-like peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59-like peptidyl-prolyl cis-trans isomerase CYP59-like peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59 peptidyl-prolyl cis-trans isomerase CYP59-like peptidyl-prolyl cis-trans isomerase CYP59
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae00790 Folate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 8
bna03250 Viral life cycle - HIV-1 5
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5722918 841810 100794150 100776900 101259174 107275963 4341804 100216940 103832541 100266806 7492108 25502342 11433733 123085141 123149138 123165763 123409258 107907362 107907507 106354110 106429083 8061594 102582851 102583150 102583525 102620553 100838874 100827878 107831678 107782644
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